Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: RNI-like

regular structure consisting of similar repeats
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046]
    2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies
  4. Superfamily: RNI-like [52047]
    regular structure consisting of similar repeats
    link to SUPERFAMILY database - Superfamily

Families:

  1. 28-residue LRR [52048] (4)
    1. Ribonuclease inhibitor [52049]
      duplication: consists of 16 repeats
      1. Pig (Sus scrofa) [TaxId: 9823] [52050] (2)
        1. 2bnh picpic
          complexed with ace
          1. chain a [30850] picpiclink
        2. 1dfj picpicxref
          complexed with ace, so4
          1. chain i [30851] picpiclink
      2. Human (Homo sapiens) [TaxId: 9606] [52051] (7)
        1. 1z7x picpicxrefxref
          automatically matched to d1a4ya_
          complexed with cit
          1. region w:1-460 [124675] picpiclink
        2. 1z7x picpicxrefxref
          automatically matched to d1a4ya_
          complexed with cit
          1. region y:1-460 [124677] picpiclink
        3. 2q4g picpicxrefxref
          automatically matched to d1a4ya_
          complexed with cit
          1. region w:1-460 [139849] picpiclink
        4. 2q4g picpicxrefxref
          automatically matched to d1a4ya_
          complexed with cit
          1. region y:1-460 [139851] picpiclink
        5. 2bex picpicxrefxref
          automatically matched to d1a4ya_
          complexed with gol, mak
          1. region a:5-460 [128398] picpiclink
        6. 2bex picpicxrefxref
          automatically matched to d1a4ya_
          complexed with gol, mak
          1. region b:4-460 [128399] picpiclink
        7. 1a4y picpicxref
          1. chain a [30852] picpiclink
          2. chain d [30853] picpiclink
    2. Tropomodulin C-terminal domain [82322]
      duplication: consists of 5 repeats
      1. Chicken (Gallus gallus) [TaxId: 9031] [82323] (1)
        1. 1io0 picpic
          complexed with zn
          1. chain a [76753] picpiclink
      2. nematode (Caenorhabditis elegans) [TaxId: 6239] [89566] (1)
        1. 1pgv picpic
          structural genomics
          1. chain a [88073] picpiclink
  2. Rna1p (RanGAP1), N-terminal domain [52052] (1)
    1. Rna1p (RanGAP1), N-terminal domain [52053]
      GTPase-activating protein for SpI1, ortologue of Ran
      duplication: consists of 11 repeats
      1. Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] [52054] (5)
        1. 2ca6 picpic
          automatically matched to d1k5dc_
          complexed with so4
          1. region a:2-345 [130151] picpiclink
        2. 2ca6 picpic
          automatically matched to d1k5dc_
          complexed with so4
          1. region b:2-345 [130152] picpiclink
        3. 1yrg picpic
          mutant
          1. chain a [30854] picpiclink
          2. chain b [30855] picpiclink
        4. 1k5d picpicxrefxref
          complexed with gnp, mg; mutant
          1. chain c [68170] picpiclink
          2. chain f [68173] picpiclink
          3. chain i [68176] picpiclink
          4. chain l [68179] picpiclink
        5. 1k5g picpicxrefxref
          complexed with af3, gdp, mg; mutant
          1. chain c [68182] picpiclink
          2. chain f [68185] picpiclink
          3. chain i [68188] picpiclink
          4. chain l [68191] picpiclink
  3. Cyclin A/CDK2-associated p19, Skp2 [52055] (1)
    1. Cyclin A/CDK2-associated p19, Skp2 [52056]
      1. Human (Homo sapiens) [TaxId: 9606] [52057] (4)
        1. 2ast picpicxrefxref
          automatically matched to d1fqva2
          complexed with ben
          1. region b:2136-2419 [127274] picpiclink
        2. 1fqv picpicxrefxrefxref
          1. region a:146-431 [30856] picpiclink
          2. region c:146-431 [30857] picpiclink
          3. region e:146-431 [30858] picpiclink
          4. region g:146-431 [30859] picpiclink
          5. region i:146-431 [30860] picpiclink
          6. region k:146-431 [30861] picpiclink
          7. region m:146-431 [30862] picpiclink
          8. region o:146-431 [30863] picpiclink
        3. 1fs2 picpicxrefxrefxref
          1. region a:146-401 [30864] picpiclink
          2. region c:146-401 [30865] picpiclink
        4. 2ass picpicxrefxref
          automatically matched to d1fqva2
          complexed with ben, po4; mutant
          1. region b:2136-2419 [127271] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk