Structural Classification of Proteins
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Protein: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) from Thermus thermophilus [TaxId: 274]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Ribokinase-like [53612]
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. Superfamily: Ribokinase-like [53613]
    has extra strand located between strands 2 and 3
    link to SUPERFAMILY database - Superfamily
  5. Family: Thiamin biosynthesis kinases [53620]
  6. Protein: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) [69589]
  7. Species: Thermus thermophilus [TaxId: 274] [89775]

PDB Entry Domains:

  1. 1ub0 picpic
    structural genomics
    complexed with dox, gol, so4
    1. chain a [88394] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk