Structural Classification of Proteins
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Family: RibD C-terminal domain-like

Pfam 01872

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Dihydrofolate reductase-like [53596]
    3 layers: a/b/a; mixed beta-sheet of 8 strands, order 34251687; strand 8 is antiparallel to the rest
  4. Superfamily: Dihydrofolate reductase-like [53597]
    link to SUPERFAMILY database - Superfamily
  5. Family: RibD C-terminal domain-like [142701]
    Pfam 01872

Protein Domains:

  1. Riboflavin biosynthesis protein RibD [142702]
    1. Bacillus subtilis [TaxId: 1423] [142703] (8)
      SQ P17618 146-359
      1. 2b3z picpicxrefxrefxrefxref
        complexed with zn
        1. region a:146-359 [127807] picpiclink
      2. 2b3z picpicxrefxrefxrefxref
        automatically matched to 2B3Z A:146-359
        complexed with zn
        1. region b:146-359 [127809] picpiclink
      3. 2b3z picpicxrefxrefxrefxref
        automatically matched to 2B3Z A:146-359
        complexed with zn
        1. region c:146-359 [127811] picpiclink
      4. 2b3z picpicxrefxrefxrefxref
        automatically matched to 2B3Z A:146-359
        complexed with zn
        1. region d:146-359 [127813] picpiclink
      5. 2d5n picpicxrefxrefxrefxref
        automatically matched to 2B3Z A:146-359
        complexed with ndp, zn
        1. region a:146-359 [131273] picpiclink
      6. 2d5n picpicxrefxrefxrefxref
        automatically matched to 2B3Z A:146-359
        complexed with ndp, zn
        1. region b:146-359 [131275] picpiclink
      7. 2d5n picpicxrefxrefxrefxref
        automatically matched to 2B3Z A:146-359
        complexed with ndp, zn
        1. region c:146-359 [131277] picpiclink
      8. 2d5n picpicxrefxrefxrefxref
        automatically matched to 2B3Z A:146-359
        complexed with ndp, zn
        1. region d:146-359 [131279] picpiclink
    2. Thermotoga maritima [TaxId: 2336] [142704] (1)
      SQ Q9X2E8 148-345
      1. 2hxv picpicxref
        complexed with cl, gol, ndp, zn
        1. region a:148-345 [136859] picpiclink
  2. HTP reductase [142705]
    monofunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase
    1. Methanococcus jannaschii [TaxId: 2190] [142706] (6)
      SQ Q58085 6-224
      1. 2azn picpic
        complexed with epe, ma5, nap
        1. region a:6-224 [127608] picpiclink
      2. 2azn picpic
        automatically matched to 2AZN A:6-224
        complexed with epe, ma5, nap
        1. region b:6-224 [127609] picpiclink
      3. 2azn picpic
        automatically matched to 2AZN A:6-224
        complexed with epe, ma5, nap
        1. region c:6-224 [127610] picpiclink
      4. 2azn picpic
        automatically matched to 2AZN A:6-224
        complexed with epe, ma5, nap
        1. region d:6-224 [127611] picpiclink
      5. 2azn picpic
        automatically matched to 2AZN A:6-224
        complexed with epe, ma5, nap
        1. region e:6-224 [127612] picpiclink
      6. 2azn picpic
        automatically matched to 2AZN A:6-224
        complexed with epe, ma5, nap
        1. region f:6-224 [127613] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk