Structural Classification of Proteins
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Superfamily: PLC-like phosphodiesterases

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: PLC-like phosphodiesterases [51695]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Mammalian PLC [51696] (2)
    1. Phospholipase C isozyme D1 (PLC-D1) [51697]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [51698] (10)
        1. 1qas picpicxrefxref
          1. region a:299-625 [29585] picpiclink
          2. region b:299-625 [29586] picpiclink
        2. 1djx picpicxrefxref
          complexed with act, ca, i3p; mutant
          1. region a:299-625 [29587] picpiclink
          2. region b:299-625 [29588] picpiclink
        3. 1djh picpicxrefxref
          complexed with act, ba; mutant
          1. region a:299-625 [29591] picpiclink
          2. region b:299-625 [29592] picpiclink
        4. 1djw picpicxrefxref
          complexed with act, ca, cip; mutant
          1. region a:299-625 [29589] picpiclink
          2. region b:299-625 [29590] picpiclink
        5. 1dji picpicxrefxref
          complexed with act, ca; mutant
          1. region a:299-625 [29593] picpiclink
          2. region b:299-625 [29594] picpiclink
        6. 1djg picpicxrefxref
          complexed with act, la; mutant
          1. region a:299-625 [29595] picpiclink
          2. region b:299-625 [29596] picpiclink
        7. 2isd picpicxrefxref
          complexed with act; mutant
          1. region a:299-625 [29597] picpiclink
          2. region b:299-625 [29598] picpiclink
        8. 1djy picpicxrefxref
          complexed with act, ca, i2p; mutant
          1. region a:299-625 [29601] picpiclink
          2. region b:299-625 [29602] picpiclink
        9. 1djz picpicxrefxref
          complexed with act, ca, ip2; mutant
          1. region a:299-625 [29603] picpiclink
          2. region b:299-625 [29604] picpiclink
        10. 1qat picpicxrefxref
          complexed with sm
          1. region a:299-625 [29599] picpiclink
          2. region b:299-625 [29600] picpiclink
    2. Phospholipase C-beta-2 [159421]
      1. Human (Homo sapiens) [TaxId: 9606] [159422] (2)
        SQ Q00722 312-660
        1. 2zkm picpicxrefxrefxref
          automatically matched to 2FJU B:312-660
          complexed with ca
          1. region x:312-660 [154590] picpiclink
        2. 2fju picpicxrefxrefxrefxref
          complexed with ca, gsp, mg
          1. region b:312-660 [145173] picpiclink
  2. Bacterial PLC [51699] (2)
    1. Phosphatidylinositol-specific phospholipase C [51700]
      1. Bacillus cereus [TaxId: 1396] [51701] (9)
        1. 2ptd picpic
          mutant
          1. chain a [29605] picpiclink
        2. 3ptd picpic
          mutant
          1. chain a [29607] picpiclink
        3. 1gym picpic
          complexed with myg
          1. chain a [29606] picpiclink
        4. 4ptd picpic
          mutant
          1. chain a [29608] picpiclink
        5. 1ptg picpic
          complexed with ins
          1. chain a [29612] picpiclink
        6. 5ptd picpic
          mutant
          1. chain a [29610] picpiclink
        7. 1ptd picpic
          1. chain a [29609] picpiclink
        8. 6ptd picpic
          mutant
          1. chain a [29611] picpiclink
        9. 7ptd picpic
          mutant
          1. chain a [29613] picpiclink
      2. Listeria monocytogenes [TaxId: 1639] [51702] (2)
        1. 2plc picpic
          1. chain a [29614] picpiclink
        2. 1aod picpic
          complexed with ins
          1. chain a [29615] picpiclink
  3. Glycerophosphoryl diester phosphodiesterase [89508] (4)
    Pfam 03009
    1. Hypothetical protein TM1621 [89509]
      1. Thermotoga maritima [TaxId: 2336] [89510] (1)
        1. 1o1z picpic
          structural genomics
          complexed with na
          1. chain a [86555] picpiclink
    2. Glycerophosphodiester phosphodiesterase GlpQ [110382]
      1. Escherichia coli [TaxId: 562] [110383] (3)
        SQ P09394
        1. 1ydy picpic
          automatically matched to d1t8qb_
          complexed with ca, gol
          1. region a:29-356 [123006] picpiclink
        2. 1ydy picpic
          automatically matched to d1t8qb_
          complexed with ca, gol
          1. region b:29-356 [123007] picpiclink
        3. 1t8q picpic
          Structural genomics target
          complexed with gol, mg
          1. chain a [106669] picpiclink
          2. chain b [106670] picpiclink
          3. chain c [106671] picpiclink
          4. chain d [106672] picpiclink
    3. Putative glycerophosphodiester phosphodiesterase TTHB141 [141864]
      1. Thermus thermophilus [TaxId: 274] [141865] (2)
        SQ Q53W25 8-224
        1. 1vd6 picpic
          automatically matched to 1V8E A:8-224
          complexed with gol
          1. region a:8-224 [119991] picpiclink
        2. 1v8e picpic
          1. region a:8-224 [119869] picpiclink
    4. Glycerophosphodiester phosphodiesterase UgpQ [141866]
      1. Agrobacterium tumefaciens [TaxId: 358] [141867] (4)
        SQ Q8U887 1-240
        1. 1zcc picpic
          complexed with act, so4
          1. region a:1-240 [124903] picpiclink
        2. 1zcc picpic
          automatically matched to 1ZCC A:1-240
          complexed with act, so4
          1. region c:1-234 [124904] picpiclink
        3. 1zcc picpic
          automatically matched to 1ZCC A:1-240
          complexed with act, so4
          1. region e:1-233 [124905] picpiclink
        4. 1zcc picpic
          automatically matched to 1ZCC A:1-240
          complexed with act, so4
          1. region f:1-235 [124906] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk