Structural Classification of Proteins

Family: Ribosomal protein L3

Lineage:

Root: scop
Class: All beta proteins [48724]
Fold: Reductase/isomerase/elongation factor common domain [50412]
barrel, closed; n=6, S=10; greek-key
Superfamily: Translation proteins [50447]
uperfamily
Family: Ribosomal protein L3 [50461]

Protein Domains:

Ribosomal protein L3 [50462]
superfamily fold is elaborated with additional structures
1. Archaeon Haloarcula marismortui [TaxId: 2238] [50463] (58)
  SQ P20279
  1. 1vqo
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
    1. region b:1-337 [120363]
  2. 3cc2
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
    1. region b:1-337 [156172]
  3. 1vq8
    automatically matched to d1jj2b_
    complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
    1. region b:1-337 [120189]
  4. 1vqp
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
    1. region b:1-337 [120392]
  5. 1jj2
    complexed with cd, cl, k, mg, na
    1. chain b [63086]
  6. 1yhq
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
    1. region b:1-337 [123184]
  7. 1vql
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
    1. region b:1-337 [120276]
  8. 1vqk
    automatically matched to d1jj2b_
    complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
    1. region b:1-337 [120247]
  9. 1s72
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
    1. chain b [105320]
  10. 1vqm
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
    1. region b:1-337 [120305]
  11. 3ccm
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
    1. region b:1-337 [156335]
  12. 1vqn
    automatically matched to d1jj2b_
    complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
    1. region b:1-337 [120334]
  13. 3cc7
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
    1. region b:1-337 [156223]
  14. 1yi2
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
    1. region b:1-337 [123231]
  15. 1yij
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
    1. region b:1-337 [123299]
  16. 3ccu
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
    1. region b:1-337 [156431]
  17. 1vq7
    automatically matched to d1jj2b_
    complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
    1. region b:1-337 [120160]
  18. 3cce
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
    1. region b:1-337 [156263]
  19. 3ccl
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
    1. region b:1-337 [156311]
  20. 1vq4
    automatically matched to d1jj2b_
    complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
    1. region b:1-337 [120073]
  21. 2otl
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
    1. region b:1-337 [139347]
  22. 1vq5
    automatically matched to d1jj2b_
    complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
    1. region b:1-337 [120102]
  23. 1vq9
    automatically matched to d1jj2b_
    complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
    1. region b:1-337 [120218]
  24. 3ccv
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
    1. region b:1-337 [156455]
  25. 3cpw
    automatically matched to d1jj2b_
    complexed with ace, cd, cl, k, mg, na, sr, zld; mutant
    1. region b:1-337 [156906]
  26. 1m90
    complexed with aca, cd, cl, k, mg, na, pha, sps
    1. chain d [78841]
  27. 1yit
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
    1. region b:1-337 [123342]
  28. 1vq6
    automatically matched to d1jj2b_
    complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
    1. region b:1-337 [120131]
  29. 3cc4
    automatically matched to d1jj2b_
    complexed with 1ma, anm, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
    1. region b:1-337 [156199]
  30. 3ccq
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
    1. region b:1-337 [156359]
  31. 3cd6
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3; mutant
    1. region b:1-337 [156479]
  32. 2otj
    automatically matched to d1jj2b_
    complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
    1. region b:1-337 [139318]
  33. 3ccs
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
    1. region b:1-337 [156407]
  34. 3cma
    automatically matched to d1jj2b_
    complexed with 1ma, 8an, aca, cd, cl, k, mg, na, omg, omu, phe, psu, sr, ur3
    1. region b:1-337 [156775]
  35. 1yjw
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
    1. region b:1-337 [123466]
  36. 1nji
    complexed with cd, cl, clm, k, mg, na; mutant
    1. chain d [85794]
  37. 2qex
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, neg, omg, omu, psu, ur3
    1. region b:1-337 [150691]
  38. 3ccr
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
    1. region b:1-337 [156383]
  39. 1kqs
    complexed with aca, btn, cd, cl, k, mg, na, pha, ppu
    1. chain b [68816]
  40. 3ccj
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
    1. region b:1-337 [156287]
  41. 1kc8
    complexed with bls, cd, cl, k, mg, na
    1. chain d [84358]
  42. 1yjn
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
    1. region b:1-337 [123434]
  43. 1n8r
    complexed with cd, cl, k, mg, na, vir; mutant
    1. chain d [85430]
  44. 1k73
    complexed with anm, cd, cl, k, mg, na
    1. chain d [84319]
  45. 1yj9
    automatically matched to d1jj2b_
    complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
    1. region b:1-337 [123395]
  46. 1qvg
    complexed with cd, cl, k, mg, na
    1. chain b [96393]
  47. 1q82
    complexed with cd, cl, k, mg, na, ppu
    1. chain d [96130]
  48. 1qvf
    complexed with cd, cl, k, mg, na
    1. chain b [96363]
  49. 1q81
    complexed with cd, cl, k, mg, na, ppu
    1. chain d [96100]
  50. 1k9m
    complexed with cd, cl, k, mg, na, tyk
    1. chain d [72214]
  51. 1kd1
    complexed with cd, cl, k, mg, na, spr
    1. chain d [72325]
  52. 1k8a
    complexed with cai, cd, cl, k, mg, na
    1. chain d [72147]
  53. 1m1k
    complexed with cd, cl, k, mg, na, zit
    1. chain d [74385]
  54. 3cme
    automatically matched to d1jj2b_
    complexed with 1ma, 8an, aca, cd, cl, k, mg, na, omg, omu, phe, psu, sr, ur3
    1. region b:1-337 [156811]
  55. 1q86
    complexed with cd, cl, k, mg, na, pha
    1. chain d [96168]
  56. 2qa4
    automatically matched to d1jj2b_
    complexed with cd, cl, k, mg, na, omg, omu, psu, ur3
    1. region b:1-337 [150176]
  57. 1q7y
    complexed with cd, cl, k, mg, na, po4, puy
    1. chain d [96066]
  58. 1ffk
    CA-atoms only
    complexed with cd, k, mo3; mutant
    1. chain b [25719]
2. Thermus thermophilus [TaxId: 274] [159158] (11)
  SQ Q72I04 1-205
  1. 2j01
    Representative structure
    1. region e:1-205 [145566]
  2. 2j03
    automatically matched to 2J01 E:1-205
    complexed with lys
    1. region e:1-205 [145593]
  3. 3d5b
    automatically matched to 2J01 E:1-205
    complexed with mg
    1. region e:1-204 [157357]
  4. 3d5d
    automatically matched to 2J01 E:1-205
    complexed with mg
    1. region e:1-204 [157387]
  5. 2v47
    automatically matched to 2J01 E:1-205
    1. region e:1-205 [152510]
  6. 2v49
    automatically matched to 2J01 E:1-205
    1. region e:1-205 [152545]
  7. 1vsp
    automatically matched to 2J01 E:1-205
    1. region c:3-203 [145792]
  8. 2hgq
    automatically matched to 2J01 E:1-205
    1. region e:1-205 [145339]
  9. 1vsa
    automatically matched to 2J01 E:1-205
    1. region c:3-203 [144518]
  10. 2hgj
    automatically matched to 2J01 E:1-205
    1. region e:1-205 [145307]
  11. 2hgu
    automatically matched to 2J01 E:1-205
    1. region e:1-205 [145371]
3. Escherichia coli [TaxId: 562] [159159] (29)
  SQ P60438 1-209
  1. 2gyc
    automatically matched to 2AW4 D:1-209
    1. region b:1-209 [145262]
  2. 2gya
    automatically matched to 2AW4 D:1-209
    1. region b:1-209 [145240]
  3. 2qam
    automatically matched to 2AW4 D:1-209
    complexed with mg, nmy, zn
    1. region d:1-209 [150241]
  4. 2qao
    automatically matched to 2AW4 D:1-209
    complexed with mg, nmy, zn
    1. region d:1-209 [150294]
  5. 2i2t
    automatically matched to 2AW4 D:1-209
    complexed with mg, zn
    1. region d:1-209 [145443]
  6. 2i2v
    automatically matched to 2AW4 D:1-209
    complexed with mg, zn
    1. region d:1-209 [145485]
  7. 2qbe
    automatically matched to 2AW4 D:1-209
    complexed with mg, zn
    1. region d:1-209 [150461]
  8. 2qbg
    automatically matched to 2AW4 D:1-209
    complexed with mg, zn
    1. region d:1-209 [150515]
  9. 2qoz
    automatically matched to 2AW4 D:1-209
    complexed with mg, nmy, zn
    1. region d:1-209 [151117]
  10. 2qp1
    automatically matched to 2AW4 D:1-209
    complexed with mg, nmy, zn
    1. region d:1-209 [151170]
  11. 3df2
    automatically matched to 2AW4 D:1-209
    complexed with mg, zn
    1. region d:1-209 [157630]
  12. 3df4
    automatically matched to 2AW4 D:1-209
    complexed with mg, zn
    1. region d:1-209 [157684]
  13. 2qba
    automatically matched to 2AW4 D:1-209
    complexed with lll, mg, zn
    1. region d:1-209 [150354]
  14. 2qbc
    automatically matched to 2AW4 D:1-209
    complexed with lll, mg, zn
    1. region d:1-209 [150407]
  15. 2qbi
    automatically matched to 2AW4 D:1-209
    complexed with lll, mg, zn
    1. region d:1-209 [150569]
  16. 2qbk
    automatically matched to 2AW4 D:1-209
    complexed with lll, mg, zn
    1. region d:1-209 [150623]
  17. 2qov
    automatically matched to 2AW4 D:1-209
    complexed with mg, zn
    1. region d:1-209 [151011]
  18. 2qox
    automatically matched to 2AW4 D:1-209
    complexed with mg, zn
    1. region d:1-209 [151064]
  19. 1vs6
    automatically matched to 2AW4 D:1-209
    complexed with mg
    1. region d:1-209 [144458]
  20. 1vs8
    automatically matched to 2AW4 D:1-209
    complexed with mg
    1. region d:1-209 [144499]
  21. 2aw4
    Representative structure
    complexed with mg
    1. region d:1-209 [144867]
  22. 2awb
    automatically matched to 2AW4 D:1-209
    complexed with mg
    1. region d:1-209 [144908]
  23. 2z4l
    automatically matched to 2AW4 D:1-209
    complexed with mg, par, zn
    1. region d:1-209 [154079]
  24. 2z4n
    automatically matched to 2AW4 D:1-209
    complexed with mg, par, zn
    1. region d:1-209 [154133]
  25. 2vhm
    automatically matched to 2AW4 D:1-209
    complexed with mg; mutant
    1. region d:1-209 [153064]
  26. 2vhn
    automatically matched to 2AW4 D:1-209
    complexed with mg
    1. region d:1-209 [153096]
  27. 2rdo
    automatically matched to 2AW4 D:1-209
    1. region d:1-209 [151941]
  28. 2j28
    automatically matched to 2AW4 D:1-209
    complexed with mg
    1. region d:1-209 [145624]
  29. 3bbx
    automatically matched to 2AW4 D:1-209
    complexed with mg
    1. region d:1-209 [155100]
4. Deinococcus radiodurans [TaxId: 1299] [159160] (9)
  SQ Q9RXK2 1-205
  1. 2zjr
    Representative structure
    complexed with mg
    1. region b:1-205 [154555]
  2. 2ogm
    automatically matched to 2ZJR B:1-205
    complexed with g19
    1. region b:1-205 [148771]
  3. 2ogo
    automatically matched to 2ZJR B:1-205
    complexed with g34
    1. region b:1-205 [148773]
  4. 1xbp
    automatically matched to 2ZJR B:1-205
    complexed with mul
    1. region b:1-205 [145867]
  5. 2ogn
    automatically matched to 2ZJR B:1-205
    complexed with g80
    1. region b:1-205 [148772]
  6. 2zjq
    automatically matched to 2ZJR B:1-205
    1. region b:1-205 [154524]
  7. 3cf5
    automatically matched to 2ZJR B:1-205
    complexed with mg, txx
    1. region b:1-205 [156540]
  8. 2zjp
    automatically matched to 2ZJR B:1-205
    complexed with mg, nsh, zn
    1. region b:1-205 [154492]
  9. 3dll
    automatically matched to 2ZJR B:1-205
    complexed with mg, zld, zn
    1. region b:1-205 [157779]