Structural Classification of Proteins
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Family: Myf domain

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: OB-fold [50198]
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. Superfamily: Nucleic acid-binding proteins [50249]
    link to SUPERFAMILY database - Superfamily
  5. Family: Myf domain [50277]

Protein Domains:

  1. Domain B2 of PheRS-beta, PheT [50278]
    1. Thermus thermophilus [TaxId: 274] [50279] (9)
      identical sequence to Thermus aquaticus, TaxId: 271
      1. 1jjc picpicxrefxrefxrefxrefxref
        complexed with fa5, mn, so4
        1. region b:39-151 [66761] picpiclink
      2. 2aly picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1b70b3
        complexed with mn, so4, ysa
        1. region b:39-151 [126990] picpiclink
      3. 1pys picpicxrefxrefxrefxrefxref
        complexed with mg
        1. region b:39-151 [25311] picpiclink
      4. 2amc picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1b70b3
        complexed with mg, so4, tyr
        1. region b:39-151 [127005] picpiclink
      5. 2akw picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1b70b3
        complexed with 200, mn, so4
        1. region b:39-151 [126940] picpiclink
      6. 1b7y picpicxrefxrefxrefxrefxref
        1. region b:39-151 [25312] picpiclink
      7. 2iy5 picpicxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1b70b3
        complexed with fya, mg
        1. region b:39-151 [137796] picpiclink
      8. 1b70 picpicxrefxrefxrefxrefxref
        1. region b:39-151 [25313] picpiclink
      9. 1eiy picpicxrefxrefxrefxrefxrefxref
        1. region b:39-151 [25314] picpiclink
  2. C-terminal domain of methionyl-tRNA synthetase, MetRS-CD [82102]
    1. Archaeon Pyrococcus abyssi [TaxId: 29292] [82103] (1)
      1. 1mkh picpic
        1. chain a [79238] picpiclink
  3. EMAP II [50280]
    domain of the p43 protein
    1. Human (Homo sapiens) [TaxId: 9606] [50281] (3)
      1. 1fl0 picpic
        contains C-terminal His tag
        1. chain a [25315] picpiclink
      2. 1euj picpic
        1. chain a [25316] picpiclink
        2. chain b [25317] picpiclink
      3. 1e7z picpic
        contains C-terminal His tag
        complexed with hg
        1. chain a [25318] picpiclink
  4. C-terminal domain of metazoan tyrosyl-tRNA synthetase, TyrRS [89326]
    EMAP II-like domain found in vertebrata and insect enzymes; free domain possesses a cytokine activity
    1. Human (Homo sapiens) [TaxId: 9606] [89327] (1)
      1. 1ntg picpic
        1. chain a [86164] picpiclink
        2. chain b [86165] picpiclink
        3. chain c [86166] picpiclink
        4. chain d [86167] picpiclink
  5. Structure-specific tRNA-binding protein TRBP111 [89328]
    1. Escherichia coli [TaxId: 562] [89329] (1)
      YgjH
      1. 1pxf picpic
        1. chain a [88341] picpiclink
    2. Aquifex aeolicus [TaxId: 63363] [101763] (1)
      aq_422; putative methionyl-tRNA synthetase beta subunit
      1. 1pyb picpic
        1. chain a [95330] picpiclink
        2. chain b [95331] picpiclink
        3. chain c [95332] picpiclink
        4. chain d [95333] picpiclink
  6. TRBP111 homolog CsaA [63770]
    possesses export-related chaperone and tRNA-binding activities
    1. Thermus thermophilus [TaxId: 274] [63771] (1)
      1. 1gd7 picpic
        1. chain a [60441] picpiclink
        2. chain b [60442] picpiclink
        3. chain c [60443] picpiclink
        4. chain d [60444] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk