Structural Classification of Proteins
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Fold: Galactose-binding domain-like

sandwich; 9 strands in 2 sheets; jelly-roll

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Galactose-binding domain-like [49784]
    sandwich; 9 strands in 2 sheets; jelly-roll

Superfamilies:

  1. Galactose-binding domain-like [49785] (32)
    link to SUPERFAMILY database - Superfamily
    1. Galactose-binding domain [49786] (4) picpic
    2. Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) [49791] (4) picpic
    3. APC10-like [69210] (3) picpic
      Pfam 03256
    4. delta-Endotoxin, C-terminal domain [49796] (4) picpic
    5. Ephrin receptor ligand binding domain [49800] (2) picpic
    6. beta-Galactosidase/glucuronidase, N-terminal domain [49803] (5) picpic
    7. Chondroitin ABC lyase I, N-terminal domain [89236] (1) picpic
    8. CBM4/9 [74893] (3) picpic
    9. Family 6 carbohydrate binding module, CBM6 [69213] (4) picpic
    10. CBM15 [69216] (1) picpic
    11. Family 17 carbohydrate binding module, CBM17 [69219] (1) picpic
    12. CBM22 [49811] (1) picpic
      CBM family 22, formerly x6b domain
    13. Family 27 carbohydrate binding module, CBM27 [89241] (2) picpic
    14. Family 29 carbohydrate binding module, CBM29 [89244] (1) picpic
    15. Fucose binding lectin [74896] (1) picpic
    16. N-terminal domain of xrcc1 [49814] (1) picpic
    17. F-box associated region, FBA [101585] (1) picpic
    18. Allantoicase repeat [101588] (1) picpic
    19. PepX C-terminal domain-like [69222] (4) picpic
    20. PA-IL, galactose-binding lectin 1 [82022] (1) picpic
      a truncated form of this fold lacking one of the N-terminal strands
    21. Proprotein convertase P-domain [89249] (3) picpic
      a truncated form of this fold lacking one of the N-terminal strands
    22. Family 28 carbohydrate binding module, CBM28 [110122] (1) picpic
    23. Family 30 carbohydrate binding module, CBM30 (PKD repeat) [110125] (1) picpic
    24. Rhamnogalacturonase B, RhgB, C-terminal domain [110128] (1) picpic
    25. Hypothetical protein AT3g04780/F7O18_27 [117108] (1) picpic
      Pfam 06201; DUF1000
    26. Beta-galactosidase LacA, domains 4 and 5 [117111] (1) picpic
      duplication: tandem repeat of two similar domains; some sequence similarity to the beta-Galactosidase/glucuronidase N-terminal domain (scop_fa 49803)
    27. Family 36 carbohydrate binding module, CBM36 [117114] (1) picpic
    28. Extended PAW domain [141113] (1) picpic
      single domain; the N-terminal half is covered by Pfam 04721; DUF750 (Smart 00613; PAW), the C-terminal half by PfamB 028386
    29. CBM11 [141116] (1) picpic
      Pfam 03425; Carbohydrate binding domain (family 11)
    30. beta-mannanase CBM [141119] (1) picpic
    31. YxiM N-terminal domain-like [158963] (1) picpic
      PfamB 038265
    32. NPCBM-like [158966] (2) picpic
      Pfam 08305

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk