Structural Classification of Proteins
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Fold: PUA domain-like

pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: PUA domain-like [88696]
    pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other

Superfamilies:

  1. PUA domain-like [88697] (13)
    link to SUPERFAMILY database - Superfamily
    1. PUA domain [88698] (10) picpic
      RNA-binding domain
    2. ATP sulfurylase N-terminal domain [63801] (5) picpic
      contains extra structures; some similarity to the PK beta-barrel domain
    3. YggJ N-terminal domain-like [89451] (3) picpic
    4. Hypothetical protein EF3133 [110339] (1) picpic
      Pfam 06171; DUF984
    5. Hypothetical protein TTHA0113 [117348] (1) picpic
      Pfam 04266; DUF437
    6. ProFAR isomerase associated domain [117351] (2) picpic
      Pfam 07060; DUF1530
    7. yqfB-like [117356] (1) picpic
      Pfam 06164; DUF978
    8. Atu2648/PH1033-like [141703] (6) picpic
      Pfam 01878; DUF55
    9. Hypothetical RNA methyltransferase domain (HRMD) [141716] (3) picpic
      N-terminal part of Pfam 03602, structurally similar to PUA domain family
    10. LON domain-like [141723] (2) picpic
      Pfam 02190
    11. PrgU-like [159365] (1) picpic
      Pfam 09627
    12. SRA domain-like [159368] (2) picpic
      Pfam 02182; recognizes the modified cytosine base (m5C) by flipping it out of DNA
    13. YtmB-like [159372] (1) picpic
      PfamB 020780
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk