Protein: VMA1-derived endonuclease (VDE) PI-Scei intein from Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

SQ P17255 284-737

Lineage:

1. Root: scop
2. Class: All beta proteins [48724]
3. Fold: Hedgehog/intein (Hint) domain [51293]
   complex fold made of five beta-hairpin units and a b-ribbon arc
4. Superfamily: Hedgehog/intein (Hint) domain [51294]
   duplication: contains two intertwined structural repeats
   uperfamily
5. Family: Intein (protein splicing domain) [51298]
6. Protein: VMA1-derived endonuclease (VDE) PI-Scei intein [51299]
   also contains a homing endonuclease and DNA-binding domains
7. Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [51300]
   SQ P17255 284-737

PDB Entry Domains:

1. 1gpp
   domain I only
   mutant
   1. chain a [76262]
2. 1jva
   contains the N and C extein propeptides
   mutant
   1. region a:282-463,a:699-741 [77175]
   2. region b:279-463,b:699-741 [77178]
3. 1ef0
   miniprecursor; a few extra residues are added at the N-terminus
   complexed with zn
   1. region a:1-180,a:416-455 [28376]
   2. region b:1-180,b:416-458 [28377]
4. 1dfa
   1. region a:1-180,a:416-454 [28375]
5. 1vde
   1. region a:1-180,a:416-454 [28378]
   2. region b:1-180,b:416-454 [28379]
6. 1um2
   complexed with the ligated extein segment (SQ P17255 281-283,738-741), chains C and D
   mutant
   1. region a:284-463,a:699-737 [107946]
   2. region b:284-463,b:699-737 [107949]
7. 1lwt
   complexed with mse
   1. region a:1-180,a:416-454 [78278]
8. 1lws
   complexed with ca, mse
   1. region a:1-180,a:416-454 [78275]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk