Structural Classification of Proteins
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Superfamily: AFP III-like domain

duplication: consists of two structural repeats related by pseudo dyad
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: beta-clip [51268]
    double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll
  4. Superfamily: AFP III-like domain [51269]
    duplication: consists of two structural repeats related by pseudo dyad
    link to SUPERFAMILY database - Superfamily

Families:

  1. AFP III-like domain [51270] (5)
    Pfam 01354
    1. Type III antifreeze protein, AFP III [51271]
      1. Ocean pout (Macrozoarces americanus), different isoforms [TaxId: 8199] [51272] (31) picpic
      2. Antarctic eel pout (Lycodichthys dearborni), RD1 isoform [TaxId: 8201] [89424] (1) picpic
      3. Antarctic eel pout (Austrolycichthys brachycephalus) and (Lycodichthys dearborni), RD3 isoform [TaxId: 36221] [51273] (4) picpic
        duplication: intramolecular dimer
    2. Spore coat polysaccharide biosynthesis protein SpsE, C-terminal domain [110328]
      1. Bacillus subtilis [TaxId: 1423] [110329] (1) picpic
        SQ P39625
    3. Capsule biosynthesis protein SiaC, C-terminal domain [117330]
      1. Neisseria meningitidis [TaxId: 487] [117331] (4) picpic
        SQ Q57265
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk