Structural Classification of Proteins
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Family: Retinol binding protein-like

barrel, closed; n=8, S=12, meander

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Lipocalins [50813]
    barrel, closed or opened; n=8, S=12; meander
  4. Superfamily: Lipocalins [50814]
    bind hydrophobic ligands in their interior
    link to SUPERFAMILY database - Superfamily
  5. Family: Retinol binding protein-like [50815]
    barrel, closed; n=8, S=12, meander

Protein Domains:

  1. Retinol binding protein [50816]
    1. Cow (Bos taurus) [TaxId: 9913] [50817] (13) picpic
    2. Pig (Sus scrofa domestica) [TaxId: 9823] [50818] (1) picpic
    3. Human (Homo sapiens) [TaxId: 9606] [50819] (4) picpic
    4. Chicken (Gallus gallus) [TaxId: 9031] [50820] (1) picpic
    5. Chicken (Gallus gallus), plasma isoform [TaxId: 9031] [69297] (1) picpic
  2. Odorant-binding protein [50821]
    C-termini swapping dimer
    1. Cow (Bos taurus) [TaxId: 9913] [50822] (8) picpic
    2. Pig (Sus scrofa) [TaxId: 9823] [50823] (9) picpic
  3. Lipocalin allergen [50824]
    1. Cow (Bos taurus), bos d 2 [TaxId: 9913] [50825] (1) picpic
    2. Horse (Equus caballus), equ c 1 [TaxId: 9796] [50826] (1) picpic
  4. Salivary lipocalin [74996]
    1. Pig (Sus scrofa) [TaxId: 9823] [74997] (1) picpic
  5. Aphrodisin, a sex pheromone [63805]
    1. Golden hamster (Mesocricetus auratus) [TaxId: 10036] [63806] (1) picpic
  6. beta-Lactoglobulin [50827]
    1. Cow (Bos taurus) [TaxId: 9913] [50828] (26) picpic
      SQ P02754
    2. Pig (Sus scrofa) [TaxId: 9823] [50829] (1) picpic
    3. Reindeer (Rangifer tarandus) [TaxId: 9870] [141461] (6) picpic
      SQ P02755 19-180
  7. Retinoic acid-binding protein [50830]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [50831] (2) picpic
  8. Major urinary protein/alpha-2u-globulin [50832]
    1. Mouse (Mus musculus) [TaxId: 10090] [50833] (19) picpic
    2. Rat (Rattus norvegicus) [TaxId: 10116] [50834] (2) picpic
  9. Neutrophil gelatinase-associated lipocalin (NGAL) [50835]
    1. Human (Homo sapiens) [TaxId: 9606] [50836] (13) picpic
  10. Lipocalin q83 [89364]
    activated expression by the myc oncogene
    1. Common quail (Coturnix coturnix) [TaxId: 9091] [89365] (1) picpic
  11. Complement protein C8gamma [74998]
    1. Human (Homo sapiens) [TaxId: 9606] [74999] (2) picpic
  12. Bilin-binding protein [50837]
    1. Cabbage butterfly (Pieris brassicae) [TaxId: 7116] [50838] (6) picpic
  13. Alpha-crustacyanin [63807]
    1. European lobster (Homarus gammarus) [TaxId: 6707] [63808] (7) picpic
  14. Outer membrane lipoprotein Blc [101861]
    bacterial lipocalin
    1. Escherichia coli [TaxId: 562] [101862] (1) picpic
  15. Histamine binding protein [50839]
    1. Brown ear tick (Rhipicephalus appendiculatus) [TaxId: 34631] [50840] (2) picpic
  16. Nitrophorin 1 [50841]
    1. Rhodnius prolixus [TaxId: 13249] [50842] (8) picpic
  17. Nitrophorin 2 (prolixin-s) [50843]
    1. Rhodnius prolixus [TaxId: 13249] [50844] (14) picpic
      SQ Q26241
  18. Nitrophorin 4 [50845]
    1. Rhodnius prolixus [TaxId: 13249] [50846] (34) picpic
      SQ Q94734 22-205
  19. Von Ebner's gland protein (VEGP, tear lipocalin) [117265]
    1. Human (Homo sapiens) [TaxId: 9606] [117266] (1) picpic
      SQ P31025 30-168
  20. Insecticyanin [141462]
    1. Tobacco hornworm (Manduca sexta) [TaxId: 7130] [141463] (1) picpic
      SQ P00305 1-189
  21. Hypothetical protein YxeF [159228]
    1. Bacillus subtilis [TaxId: 1423] [159229] (1) picpic
      SQ P54945 19-144
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk