Fold: TraM-like

multihelical oligomeric protein; structure of whole subunit is not known; the N-terminal part is implicated in DNA binding, the middle region forms tetrameric parallel coiled coil, surrounded by the C-terminal helices

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]
3. Fold: TraM-like [140580]
   multihelical oligomeric protein; structure of whole subunit is not known; the N-terminal part is implicated in DNA binding, the middle region forms tetrameric parallel coiled coil, surrounded by the C-terminal helices

Superfamilies:

1. TraM-like [140581] (1)
   uperfamily
   1. TraM-like [140582] (2)
      Pfam 05261
      1. TraM [140583]
         also includes the N-terminal domain structure 1dp3, previously classified into a different family (scop_fa 63566)
         1. Escherichia coli [TaxId: 562] [140584] (2)
            SQ P10026 50-127! SQ P10026 60-167
            1. 2g7o
               1. region a:60-127 [134736]
            2. 2g9e
               mutant
               1. region a:60-127 [134799]
         2. Escherichia coli K12 (Escherichia coli K-12) [TaxId: 83333] [158509] (8)
            1. 3d8a
               automatically matched to d2g7oa1
               1. region a:60-122 [157448]
            2. 3d8a
               automatically matched to d2g7oa1
               1. region b:60-122 [157449]
            3. 3d8a
               automatically matched to d2g7oa1
               1. region c:60-122 [157450]
            4. 3d8a
               automatically matched to d2g7oa1
               1. region d:60-122 [157451]
            5. 3d8a
               automatically matched to d2g7oa1
               1. region e:60-122 [157452]
            6. 3d8a
               automatically matched to d2g7oa1
               1. region f:60-122 [157453]
            7. 3d8a
               automatically matched to d2g7oa1
               1. region g:60-122 [157454]
            8. 3d8a
               automatically matched to d2g7oa1
               1. region h:60-122 [157455]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk