Structural Classification of Proteins
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Superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin

can be classified as disulfide-rich
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin [47698]
    4 helices; folded leaf; right-handed superhelix
  4. Superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin [47699]
    can be classified as disulfide-rich
    link to SUPERFAMILY database - Superfamily

Families:

  1. Plant lipid-transfer and hydrophobic proteins [47700] (7)
    1. Soybean hydrophobic protein [47701]
      1. Soybean (Glycine max) [TaxId: 3847] [47702] (1)
        1. 1hyp picpic
          1. chain a [17806] picpiclink
    2. Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) [47703]
      1. Wheat (Triticum aestivum), L. seeds [TaxId: 4565] [47704] (3)
        1. 1bwo picpic
          complexed with lpc
          1. chain a [17807] picpiclink
          2. chain b [17808] picpiclink
        2. 1cz2 picpic
          complexed with prostaglandin b2
          complexed with e2p
          1. chain a [17809] picpiclink
        3. 1gh1 picpic
          1. chain a [17810] picpiclink
      2. Barley (Hordeum vulgare) [TaxId: 4513] [47705] (4)
        1. 1mid picpic
          complexed with lap
          1. chain a [91280] picpiclink
        2. 1be2 picpic
          complexed with plm
          1. chain a [17812] picpiclink
        3. 1lip picpic
          1. chain a [17811] picpiclink
        4. 1jtb picpic
          complexed with coa, plm
          1. chain a [17813] picpiclink
      3. Maize (Zea mays) [TaxId: 4577] [47706] (11)
        1. 1fk5 picpic
          complexed with fmt, ola
          1. chain a [59866] picpiclink
        2. 1mzm picpic
          complexed with fmt, plm
          1. chain a [17814] picpiclink
        3. 1fk1 picpic
          complexed with dao, fmt
          1. chain a [59862] picpiclink
        4. 1fk3 picpic
          complexed with fmt, pam
          1. chain a [59864] picpiclink
        5. 1fk4 picpic
          complexed with fmt, ste
          1. chain a [59865] picpiclink
        6. 1fk2 picpic
          complexed with fmt, myr
          1. chain a [59863] picpiclink
        7. 1fk0 picpic
          complexed with crc, fmt
          1. chain a [59861] picpiclink
        8. 1mzl picpic
          1. chain a [17815] picpiclink
        9. 1fk7 picpic
          complexed with fmt, rcl
          1. chain a [59868] picpiclink
        10. 1fk6 picpic
          complexed with fmt, lnl
          1. chain a [59867] picpiclink
        11. 1afh picpic
          1. chain a [17816] picpiclink
      4. Rice (Oryza sativa) [TaxId: 4530] [47707] (5)
        SQ P23096 26-116
        1. 1rzl picpic
          complexed with cxs, so4
          1. chain a [17817] picpiclink
        2. 1uvc picpic
          complexed with ste
          1. chain a [113445] picpiclink
          2. chain b [113446] picpiclink
        3. 1uvb picpic
          complexed with pam
          1. chain a [113444] picpiclink
        4. 1uva picpic
          complexed with myr
          1. chain a [113443] picpiclink
        5. 1bv2 picpic
          1. chain a [17818] picpiclink
    3. Non-specific lipid-transfer protein homologue (ns-LTP2) [81787]
      different pattern for Cys-pairing compared with ns-LTP1
      1. Rice (Oryza sativa) [TaxId: 4530] [81788] (1)
        1. 1l6h picpic
          1. chain a [77723] picpiclink
      2. Triticum turgidum [TaxId: 4571] [89073] (2)
        1. 1tuk picpic
          automatically matched to d1n89a_
          complexed with iod, pgm
          1. region a:1-67 [119342] picpiclink
        2. 1n89 picpic
          complexed with pgm
          1. chain a [85392] picpiclink
  2. Proteinase/alpha-amylase inhibitors [47708] (3)
    1. 0.19 alpha-amylase inhibitor [47709]
      1. Wheat (Triticum aestivum) [TaxId: 4565] [47710] (1)
        1. 1hss picpic
          1. chain a [17819] picpiclink
          2. chain b [17820] picpiclink
          3. chain c [17821] picpiclink
          4. chain d [17822] picpiclink
    2. Trypsin/alpha-amylase inhibitor RBI [47711]
      1. Eleusine coracana, seeds [TaxId: 4511] [47712] (3)
        1. 1tmq picpicxrefxref
          complexed with ca, cl
          1. chain b [17824] picpiclink
        2. 1b1u picpic
          mutant
          1. chain a [17823] picpiclink
        3. 1bip picpic
          1. chain a [17825] picpiclink
    3. Hageman factor/amylase inhibitor [47713]
      1. Maize (Zea mays) [TaxId: 4577] [47714] (2)
        1. 1bea picpic
          1. chain a [17826] picpiclink
        2. 1bfa picpic
          1. chain a [17827] picpiclink
  3. Seed storage protein, 2S albumin [47715] (3)
    two chains result from a single-chain precursor
    1. Napin BNIb [47716]
      1. Rape (Brassica napus) [TaxId: 3708] [47717] (1)
        1. 1pnb picpic
          1. chain a,b [17828] picpiclink
    2. 2S albumin RicC3 [101228]
      1. Castor bean (Ricinus communis) [TaxId: 3988] [101229] (1)
        1. 1psy picpic
          1. chain a [95081] picpiclink
    3. Methionine-rich 2S protein (albumin 8) [109847]
      1. Common sunflower (Helianthus annuus) [TaxId: 4232] [109848] (1)
        SQ P23110
        1. 1s6d picpic
          1. chain a [105307] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk