Structural Classification of Proteins
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Family: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Bromodomain-like [47363]
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. Superfamily: Acyl-CoA dehydrogenase C-terminal domain-like [47203]
    multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel
    link to SUPERFAMILY database - Superfamily
  5. Family: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain [47204]

Protein Domains:

  1. Butyryl-CoA dehydrogenase, C-domain [47205]
    1. Megasphaera elsdenii [TaxId: 907] [47206] (1)
      1. 1buc picpicxref
        complexed with caa, fad
        1. region a:233-383 [16590] picpiclink
        2. region b:233-383 [16591] picpiclink
    2. Rat (Rattus norvegicus) [TaxId: 10116] [69018] (1)
      1. 1jqi picpicxref
        complexed with caa, fad
        1. region a:235-387 [67087] picpiclink
        2. region b:635-787 [67089] picpiclink
  2. Medium chain acyl-CoA dehydrogenase, C-domain [47207]
    1. Pig (Sus scrofa) [TaxId: 9823] [47208] (3)
      1. 3mde picpicxref
        complexed with co8, fad
        1. region a:242-395 [16594] picpiclink
        2. region b:242-395 [16595] picpiclink
      2. 3mdd picpicxref
        complexed with fad
        1. region a:242-395 [16592] picpiclink
        2. region b:242-395 [16593] picpiclink
      3. 1udy picpicxref
        complexed with cs8, fad
        1. region a:242-395 [99231] picpiclink
        2. region b:242-393 [99233] picpiclink
        3. region c:242-395 [99235] picpiclink
        4. region d:242-395 [99237] picpiclink
    2. Human (Homo sapiens) [TaxId: 9606] [47209] (8)
      SQ P11310 34-421
      1. 1egd picpicxref
        complexed with fad; mutant
        1. region a:242-396 [16596] picpiclink
        2. region b:242-396 [16597] picpiclink
        3. region c:242-396 [16598] picpiclink
        4. region d:242-396 [16599] picpiclink
      2. 1egc picpicxref
        complexed with co8, fad; mutant
        1. region a:242-396 [16600] picpiclink
        2. region b:242-396 [16601] picpiclink
        3. region c:242-396 [16602] picpiclink
        4. region d:242-396 [16603] picpiclink
      3. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1egca1
        complexed with amp, fad; mutant
        1. region a:242-395 [126005] picpiclink
      4. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1egca1
        complexed with amp, fad; mutant
        1. region b:242-395 [126007] picpiclink
      5. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1egca1
        complexed with amp, fad; mutant
        1. region c:242-395 [126009] picpiclink
      6. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1egca1
        complexed with amp, fad; mutant
        1. region d:242-395 [126011] picpiclink
      7. 1ege picpicxref
        complexed with fad; mutant
        1. region a:242-396 [16604] picpiclink
        2. region b:242-396 [16605] picpiclink
        3. region c:242-396 [16606] picpiclink
        4. region d:242-396 [16607] picpiclink
      8. 1t9g picpicxrefxrefxref
        complexed with amp, fad
        1. region a:242-395 [106711] picpiclink
        2. region b:242-395 [106713] picpiclink
        3. region c:242-395 [106715] picpiclink
        4. region d:242-395 [106717] picpiclink
    3. Thermus thermophilus [TaxId: 274] [116882] (1)
      SQ Q5SJ70 32-409
      1. 1ukw picpicxref
        complexed with co, fad
        1. region a:259-410 [113263] picpiclink
        2. region b:259-410 [113265] picpiclink
  3. Isovaleryl-CoA dehydrogenase, C-domain [47210]
    1. Human (Homo sapiens) [TaxId: 9606] [47211] (1)
      1. 1ivh picpicxref
        complexed with cos, fad
        1. region a:242-392 [16608] picpiclink
        2. region b:242-392 [16609] picpiclink
        3. region c:242-392 [16610] picpiclink
        4. region d:242-392 [16611] picpiclink
  4. Isobutyryl-CoA dehydrogenase [101144]
    1. Human (Homo sapiens) [TaxId: 9606] [101145] (1)
      1. 1rx0 picpicxref
        complexed with 2mc, acy, egl, fad
        1. region a:241-393 [98007] picpiclink
        2. region b:241-393 [98009] picpiclink
        3. region c:241-393 [98011] picpiclink
        4. region d:241-393 [98013] picpiclink
  5. Protein FkbI [101146]
    involved in biosynthesis of methoxymalonyl extender unit of fk520 polyketide immunosuppressant
    1. Streptomyces hygroscopicus [TaxId: 1912] [101147] (1)
      1. 1r2j picpicxref
        complexed with fad
        1. region a:213-365 [96869] picpiclink
  6. Glutaryl-CoA dehydrogenase GCDH [109794]
    1. Human (Homo sapiens) [TaxId: 9606] [109795] (4)
      SQ Q92947
      1. 1siq picpicxref
        complexed with fad
        1. region a:239-392 [105585] picpiclink
      2. 2r0n picpicxref
        automatically matched to d1siqa1
        complexed with fad, tgc; mutant
        1. region a:239-392 [151506] picpiclink
      3. 1sir picpicxref
        complexed with fad, nbc
        1. region a:239-392 [105587] picpiclink
      4. 2r0m picpicxref
        automatically matched to d1siqa1
        complexed with 4ni, fad; mutant
        1. region a:239-392 [151504] picpiclink
  7. 4-hydroxybutyryl-CoA dehydratase AbfD, C-terminal domain [116883]
    1. Clostridium aminobutyricum [TaxId: 33953] [116884] (1)
      SQ P55792
      1. 1u8v picpicxref
        complexed with fad, fs4
        1. region a:276-490 [113196] picpiclink
        2. region b:276-490 [113198] picpiclink
        3. region c:276-490 [113200] picpiclink
        4. region d:276-490 [113202] picpiclink
  8. Nitroalkane oxidase [140471]
    1. Fusarium oxysporum [TaxId: 5507] [140472] (18)
      SQ Q8X1D8 261-430
      1. 2c12 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2C0U A:261-430
        complexed with fad, gol, pe4, spm
        1. region a:261-430 [129616] picpiclink
      2. 2c12 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2C0U A:261-430
        complexed with fad, gol, pe4, spm
        1. region b:261-430 [129618] picpiclink
      3. 2c12 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2C0U A:261-430
        complexed with fad, gol, pe4, spm
        1. region c:261-430 [129620] picpiclink
      4. 2c12 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2C0U A:261-430
        complexed with fad, gol, pe4, spm
        1. region d:261-430 [129622] picpiclink
      5. 2c12 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2C0U A:261-430
        complexed with fad, gol, pe4, spm
        1. region e:261-430 [129624] picpiclink
      6. 2c12 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2C0U A:261-430
        complexed with fad, gol, pe4, spm
        1. region f:261-430 [129626] picpiclink
      7. 2c0u picpicxrefxrefxrefxref
        complexed with fad, nbt
        1. region a:261-430 [129607] picpiclink
      8. 2c0u picpicxrefxrefxrefxref
        automatically matched to 2C0U A:261-430
        complexed with fad, nbt
        1. region b:261-430 [129609] picpiclink
      9. 2c0u picpicxrefxrefxrefxref
        automatically matched to 2C0U A:261-430
        complexed with fad, nbt
        1. region c:261-430 [129611] picpiclink
      10. 2c0u picpicxrefxrefxrefxref
        automatically matched to 2C0U A:261-430
        complexed with fad, nbt
        1. region d:261-430 [129613] picpiclink
      11. 2reh picpicxrefxrefxrefxref
        automatically matched to d2c0ua1
        complexed with fad; mutant
        1. region a:261-430 [151973] picpiclink
      12. 2reh picpicxrefxrefxrefxref
        automatically matched to d2c0ua1
        complexed with fad; mutant
        1. region b:261-430 [151975] picpiclink
      13. 2reh picpicxrefxrefxrefxref
        automatically matched to d2c0ua1
        complexed with fad; mutant
        1. region c:261-430 [151977] picpiclink
      14. 2reh picpicxrefxrefxrefxref
        automatically matched to d2c0ua1
        complexed with fad; mutant
        1. region d:261-430 [151979] picpiclink
      15. 2zaf picpicxrefxrefxrefxref
        automatically matched to d2c0ua1
        complexed with fad; mutant
        1. region a:261-430 [154277] picpiclink
      16. 2zaf picpicxrefxrefxrefxref
        automatically matched to d2c0ua1
        complexed with fad; mutant
        1. region b:261-430 [154279] picpiclink
      17. 2zaf picpicxrefxrefxrefxref
        automatically matched to d2c0ua1
        complexed with fad; mutant
        1. region c:261-430 [154281] picpiclink
      18. 2zaf picpicxrefxrefxrefxref
        automatically matched to d2c0ua1
        complexed with fad; mutant
        1. region d:261-430 [154283] picpiclink
  9. Acyl-CoA dehydrogenase [140473]
    1. Thermus thermophilus [TaxId: 274] [140474] (8)
      SQ Q5SGZ2 235-387
      1. 2d29 picpicxrefxref
        automatically matched to 1WS9 A:235-387
        complexed with fad
        1. region a:235-387 [131157] picpiclink
      2. 2d29 picpicxrefxref
        automatically matched to 1WS9 A:235-387
        complexed with fad
        1. region b:235-387 [131159] picpiclink
      3. 2cx9 picpicxrefxrefxrefxref
        automatically matched to 1WS9 A:235-387
        complexed with cl
        1. region a:235-387 [130985] picpiclink
      4. 2cx9 picpicxrefxrefxrefxref
        automatically matched to 1WS9 A:235-387
        complexed with cl
        1. region b:235-387 [130987] picpiclink
      5. 2cx9 picpicxrefxrefxrefxref
        automatically matched to 1WS9 A:235-387
        complexed with cl
        1. region c:235-387 [130989] picpiclink
      6. 2cx9 picpicxrefxrefxrefxref
        automatically matched to 1WS9 A:235-387
        complexed with cl
        1. region d:235-387 [130991] picpiclink
      7. 1ws9 picpicxrefxref
        1. region a:235-387 [121223] picpiclink
      8. 1ws9 picpicxrefxref
        automatically matched to 1WS9 A:235-387
        1. region b:235-387 [121225] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk