Structural Classification of Proteins
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Superfamily: Acyl-CoA dehydrogenase C-terminal domain-like

multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Bromodomain-like [47363]
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. Superfamily: Acyl-CoA dehydrogenase C-terminal domain-like [47203]
    multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel
    link to SUPERFAMILY database - Superfamily

Families:

  1. Medium chain acyl-CoA dehydrogenase-like, C-terminal domain [47204] (12)
    1. Butyryl-CoA dehydrogenase, C-domain [47205]
      1. Megasphaera elsdenii [TaxId: 907] [47206] (1)
        1. 1buc picpicxref
          complexed with caa, fad
          1. region a:233-383 [16590] picpiclink
          2. region b:233-383 [16591] picpiclink
      2. Rat (Rattus norvegicus) [TaxId: 10116] [69018] (1)
        1. 1jqi picpicxref
          complexed with caa, fad
          1. region a:235-387 [67087] picpiclink
          2. region b:635-787 [67089] picpiclink
    2. Medium chain acyl-CoA dehydrogenase, C-domain [47207]
      1. Pig (Sus scrofa) [TaxId: 9823] [47208] (3)
        1. 3mde picpicxref
          complexed with co8, fad
          1. region a:242-395 [16594] picpiclink
          2. region b:242-395 [16595] picpiclink
        2. 3mdd picpicxref
          complexed with fad
          1. region a:242-395 [16592] picpiclink
          2. region b:242-395 [16593] picpiclink
        3. 1udy picpicxref
          complexed with cs8, fad
          1. region a:242-395 [99231] picpiclink
          2. region b:242-393 [99233] picpiclink
          3. region c:242-395 [99235] picpiclink
          4. region d:242-395 [99237] picpiclink
      2. Human (Homo sapiens) [TaxId: 9606] [47209] (8)
        SQ P11310 34-421
        1. 1egd picpicxref
          complexed with fad; mutant
          1. region a:242-396 [16596] picpiclink
          2. region b:242-396 [16597] picpiclink
          3. region c:242-396 [16598] picpiclink
          4. region d:242-396 [16599] picpiclink
        2. 1egc picpicxref
          complexed with co8, fad; mutant
          1. region a:242-396 [16600] picpiclink
          2. region b:242-396 [16601] picpiclink
          3. region c:242-396 [16602] picpiclink
          4. region d:242-396 [16603] picpiclink
        3. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1egca1
          complexed with amp, fad; mutant
          1. region a:242-395 [126005] picpiclink
        4. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1egca1
          complexed with amp, fad; mutant
          1. region b:242-395 [126007] picpiclink
        5. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1egca1
          complexed with amp, fad; mutant
          1. region c:242-395 [126009] picpiclink
        6. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1egca1
          complexed with amp, fad; mutant
          1. region d:242-395 [126011] picpiclink
        7. 1ege picpicxref
          complexed with fad; mutant
          1. region a:242-396 [16604] picpiclink
          2. region b:242-396 [16605] picpiclink
          3. region c:242-396 [16606] picpiclink
          4. region d:242-396 [16607] picpiclink
        8. 1t9g picpicxrefxrefxref
          complexed with amp, fad
          1. region a:242-395 [106711] picpiclink
          2. region b:242-395 [106713] picpiclink
          3. region c:242-395 [106715] picpiclink
          4. region d:242-395 [106717] picpiclink
      3. Thermus thermophilus [TaxId: 274] [116882] (1)
        SQ Q5SJ70 32-409
        1. 1ukw picpicxref
          complexed with co, fad
          1. region a:259-410 [113263] picpiclink
          2. region b:259-410 [113265] picpiclink
    3. Isovaleryl-CoA dehydrogenase, C-domain [47210]
      1. Human (Homo sapiens) [TaxId: 9606] [47211] (1)
        1. 1ivh picpicxref
          complexed with cos, fad
          1. region a:242-392 [16608] picpiclink
          2. region b:242-392 [16609] picpiclink
          3. region c:242-392 [16610] picpiclink
          4. region d:242-392 [16611] picpiclink
    4. Isobutyryl-CoA dehydrogenase [101144]
      1. Human (Homo sapiens) [TaxId: 9606] [101145] (1)
        1. 1rx0 picpicxref
          complexed with 2mc, acy, egl, fad
          1. region a:241-393 [98007] picpiclink
          2. region b:241-393 [98009] picpiclink
          3. region c:241-393 [98011] picpiclink
          4. region d:241-393 [98013] picpiclink
    5. Protein FkbI [101146]
      involved in biosynthesis of methoxymalonyl extender unit of fk520 polyketide immunosuppressant
      1. Streptomyces hygroscopicus [TaxId: 1912] [101147] (1)
        1. 1r2j picpicxref
          complexed with fad
          1. region a:213-365 [96869] picpiclink
    6. Glutaryl-CoA dehydrogenase GCDH [109794]
      1. Human (Homo sapiens) [TaxId: 9606] [109795] (4)
        SQ Q92947
        1. 1siq picpicxref
          complexed with fad
          1. region a:239-392 [105585] picpiclink
        2. 2r0n picpicxref
          automatically matched to d1siqa1
          complexed with fad, tgc; mutant
          1. region a:239-392 [151506] picpiclink
        3. 1sir picpicxref
          complexed with fad, nbc
          1. region a:239-392 [105587] picpiclink
        4. 2r0m picpicxref
          automatically matched to d1siqa1
          complexed with 4ni, fad; mutant
          1. region a:239-392 [151504] picpiclink
    7. 4-hydroxybutyryl-CoA dehydratase AbfD, C-terminal domain [116883]
      1. Clostridium aminobutyricum [TaxId: 33953] [116884] (1)
        SQ P55792
        1. 1u8v picpicxref
          complexed with fad, fs4
          1. region a:276-490 [113196] picpiclink
          2. region b:276-490 [113198] picpiclink
          3. region c:276-490 [113200] picpiclink
          4. region d:276-490 [113202] picpiclink
    8. Nitroalkane oxidase [140471]
      1. Fusarium oxysporum [TaxId: 5507] [140472] (18)
        SQ Q8X1D8 261-430
        1. 2c12 picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2C0U A:261-430
          complexed with fad, gol, pe4, spm
          1. region a:261-430 [129616] picpiclink
        2. 2c12 picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2C0U A:261-430
          complexed with fad, gol, pe4, spm
          1. region b:261-430 [129618] picpiclink
        3. 2c12 picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2C0U A:261-430
          complexed with fad, gol, pe4, spm
          1. region c:261-430 [129620] picpiclink
        4. 2c12 picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2C0U A:261-430
          complexed with fad, gol, pe4, spm
          1. region d:261-430 [129622] picpiclink
        5. 2c12 picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2C0U A:261-430
          complexed with fad, gol, pe4, spm
          1. region e:261-430 [129624] picpiclink
        6. 2c12 picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2C0U A:261-430
          complexed with fad, gol, pe4, spm
          1. region f:261-430 [129626] picpiclink
        7. 2c0u picpicxrefxrefxrefxref
          complexed with fad, nbt
          1. region a:261-430 [129607] picpiclink
        8. 2c0u picpicxrefxrefxrefxref
          automatically matched to 2C0U A:261-430
          complexed with fad, nbt
          1. region b:261-430 [129609] picpiclink
        9. 2c0u picpicxrefxrefxrefxref
          automatically matched to 2C0U A:261-430
          complexed with fad, nbt
          1. region c:261-430 [129611] picpiclink
        10. 2c0u picpicxrefxrefxrefxref
          automatically matched to 2C0U A:261-430
          complexed with fad, nbt
          1. region d:261-430 [129613] picpiclink
        11. 2reh picpicxrefxrefxrefxref
          automatically matched to d2c0ua1
          complexed with fad; mutant
          1. region a:261-430 [151973] picpiclink
        12. 2reh picpicxrefxrefxrefxref
          automatically matched to d2c0ua1
          complexed with fad; mutant
          1. region b:261-430 [151975] picpiclink
        13. 2reh picpicxrefxrefxrefxref
          automatically matched to d2c0ua1
          complexed with fad; mutant
          1. region c:261-430 [151977] picpiclink
        14. 2reh picpicxrefxrefxrefxref
          automatically matched to d2c0ua1
          complexed with fad; mutant
          1. region d:261-430 [151979] picpiclink
        15. 2zaf picpicxrefxrefxrefxref
          automatically matched to d2c0ua1
          complexed with fad; mutant
          1. region a:261-430 [154277] picpiclink
        16. 2zaf picpicxrefxrefxrefxref
          automatically matched to d2c0ua1
          complexed with fad; mutant
          1. region b:261-430 [154279] picpiclink
        17. 2zaf picpicxrefxrefxrefxref
          automatically matched to d2c0ua1
          complexed with fad; mutant
          1. region c:261-430 [154281] picpiclink
        18. 2zaf picpicxrefxrefxrefxref
          automatically matched to d2c0ua1
          complexed with fad; mutant
          1. region d:261-430 [154283] picpiclink
    9. Acyl-CoA dehydrogenase [140473]
      1. Thermus thermophilus [TaxId: 274] [140474] (8)
        SQ Q5SGZ2 235-387
        1. 2d29 picpicxrefxref
          automatically matched to 1WS9 A:235-387
          complexed with fad
          1. region a:235-387 [131157] picpiclink
        2. 2d29 picpicxrefxref
          automatically matched to 1WS9 A:235-387
          complexed with fad
          1. region b:235-387 [131159] picpiclink
        3. 2cx9 picpicxrefxrefxrefxref
          automatically matched to 1WS9 A:235-387
          complexed with cl
          1. region a:235-387 [130985] picpiclink
        4. 2cx9 picpicxrefxrefxrefxref
          automatically matched to 1WS9 A:235-387
          complexed with cl
          1. region b:235-387 [130987] picpiclink
        5. 2cx9 picpicxrefxrefxrefxref
          automatically matched to 1WS9 A:235-387
          complexed with cl
          1. region c:235-387 [130989] picpiclink
        6. 2cx9 picpicxrefxrefxrefxref
          automatically matched to 1WS9 A:235-387
          complexed with cl
          1. region d:235-387 [130991] picpiclink
        7. 1ws9 picpicxrefxref
          1. region a:235-387 [121223] picpiclink
        8. 1ws9 picpicxrefxref
          automatically matched to 1WS9 A:235-387
          1. region b:235-387 [121225] picpiclink
  2. acyl-CoA oxidase C-terminal domains [74714] (2)
    duplication: tandem repeat of this fold
    1. Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 [74715]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [74716] (3)
        1. 2ddh picpicxref
          automatically matched to d1is2a1
          complexed with fad, hxd
          1. region a:278-460 [131394] picpiclink
        2. 2ddh picpicxref
          automatically matched to d1is2a2
          complexed with fad, hxd
          1. region a:475-655 [131395] picpiclink
        3. 1is2 picpicxref
          complexed with fad
          1. region a:272-460 [71382] picpiclink
          2. region a:475-655 [71383] picpiclink
          3. region b:278-458 [71385] picpiclink
          4. region b:475-655 [71386] picpiclink
    2. Acyl-coenzyme A oxidase 1, domains 3 and 4 [116885]
      1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [116886] (1)
        SQ O65202
        1. 1w07 picpicxref
          complexed with ca, cl, fad, pt; mutant
          1. region a:273-461 [114046] picpiclink
          2. region a:462-659 [114047] picpiclink
          3. region b:273-461 [114049] picpiclink
          4. region b:462-659 [114050] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk