Structural Classification of Proteins
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Fold: LEM/SAP HeH motif

helix-extended loop-helix; parallel helices

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: LEM/SAP HeH motif [63450]
    helix-extended loop-helix; parallel helices

Superfamilies:

  1. LEM domain [63451] (1)
    link to SUPERFAMILY database - Superfamily
    1. LEM domain [63452] (2)
      1. Thymopoietin, LAP2 [63453]
        1. Human (Homo sapiens) [TaxId: 9606] [63454] (3) picpic
      2. Inner nuclear membrane protein emerin [63455]
        1. Human (Homo sapiens) [TaxId: 9606] [63456] (3) picpic
  2. SAP domain [68906] (1)
    link to SUPERFAMILY database - Superfamily
    1. SAP domain [68907] (7)
      Pfam 02037
      1. DNA binding C-terminal domain of ku70 [68908]
        1. Human (Homo sapiens) [TaxId: 9606] [68909] (2) picpic
      2. Mitochondrial resolvase ydc2 N-terminal domain [68945]
        1. Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] [68946] (1) picpic
      3. S/mar DNA-binding protein Tho1 [74667]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [74668] (1) picpic
      4. p53 binding domain of protein inhibitor of activated STAT protein 1, PIAS-1 [116764]
        1. Human (Homo sapiens) [TaxId: 9606] [116765] (1) picpic
          SQ O75925 1-65
      5. Rififylin (FYVE-RING finger protein Sakura) [116766]
        1. Human (Homo sapiens) [TaxId: 9606] [116767] (1) picpic
          SQ Q8WZ73 45-139
      6. Nuclear protein hcc-1 [140137]
        1. Human (Homo sapiens) [TaxId: 9606] [140138] (1) picpic
          SQ P82979 5-46
      7. Heterogeneous nuclear ribonucleoprotein U-like protein 1 [140139]
        1. Human (Homo sapiens) [TaxId: 9606] [140140] (1) picpic
          SQ Q9BUJ2 1-37
  3. Rho N-terminal domain-like [68912] (2)
    link to SUPERFAMILY database - Superfamily
    1. Rho termination factor, N-terminal domain [68913] (1)
      1. Rho termination factor, N-terminal domain [68914]
        1. Escherichia coli [TaxId: 562] [50295] (14) picpic
          SQ P03002
    2. YqbF C-terminal domain-like [158225] (2)
      1. Hypothetical protein YqbF [158226]
        1. Bacillus subtilis [TaxId: 1423] [158227] (1) picpic
          SQ P45922 50-103
      2. Uncharacterized protein HI1507 in Mu-like prophage FluMu region [158228]
        1. Haemophilus influenzae [TaxId: 727] [158229] (1) picpic
          SQ P44229 1-38
  4. Recombination endonuclease VII, C-terminal and dimerization domains [68918] (1)
    link to SUPERFAMILY database - Superfamily
    1. Recombination endonuclease VII, C-terminal and dimerization domains [68919] (1)
      1. Recombination endonuclease VII, C-terminal and dimerization domains [68920]
        1. Bacteriophage T4 [TaxId: 10665] [54074] (7) picpic
  5. DNA-binding domain of EIN3-like [116768] (1)
    decorated with additional structures
    link to SUPERFAMILY database - Superfamily
    1. DNA-binding domain of EIN3-like [116769] (1)
      middle part of Pfam 04873
      1. Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 [116770]
        1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [116771] (1) picpic
          SQ O23116 162-288
  6. PRP4-like [158230] (1)
    1. PRP4-like [158231] (1)
      Pfam 08799; pre-mRNA processing factor 4 (PRP4) like
      1. Pre-mRNA-splicing factor 18 [158232]
        1. Human (Homo sapiens) [TaxId: 9606] [158233] (1) picpic
          SQ Q99633 60-122
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk