Structural Classification of Proteins
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Fold: Non-globular all-alpha subunits of globular proteins

not a true fold

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Non-globular all-alpha subunits of globular proteins [48661]
    not a true fold

Superfamilies:

  1. Ribosomal protein L39e [48662] (1)
    interrupted alpha-helix
    link to SUPERFAMILY database - Superfamily
    1. Ribosomal protein L39e [48663] (1)
      1. Ribosomal protein L39e [48664]
        1. Archaeon Haloarcula marismortui [TaxId: 2238] [48665] (58) picpic
          SQ P22452
  2. Methanol dehydrogenase subunit [48666] (1)
    consists of single alpha-helix and irregular N-terminal tail
    link to SUPERFAMILY database - Superfamily
    1. Methanol dehydrogenase subunit [48667] (3)
      1. Methanol dehydrogenase, light chain [48668]
        1. Methylophilus methylotrophus, w3a1 [TaxId: 17] [48669] (8) picpic
        2. Methylobacterium extorquens [TaxId: 408] [63633] (3) picpic
          SQ P14775
        3. Paracoccus denitrificans [TaxId: 266] [101493] (1) picpic
  3. Transducin (heterotrimeric G protein), gamma chain [48670] (1)
    long alpha-helix interrupted in the middle
    link to SUPERFAMILY database - Superfamily
    1. Transducin (heterotrimeric G protein), gamma chain [48671] (2)
      1. Transducin (heterotrimeric G protein), gamma chain [48672]
        1. Cow (Bos taurus) [TaxId: 9913] [48673] (11) picpic
        2. Homo sapiens [TaxId: 9606] [158850] (1) picpic
  4. Fe-only hydrogenase smaller subunit [48674] (1)
    link to SUPERFAMILY database - Superfamily
    1. Fe-only hydrogenase smaller subunit [48675] (1)
      1. Fe-only hydrogenase smaller subunit [48676]
        string of short helices wrapped around the larger subunit
        1. Desulfovibrio desulfuricans [TaxId: 876] [48677] (1) picpic
  5. Moesin tail domain [48678] (1)
    link to SUPERFAMILY database - Superfamily
    1. Moesin tail domain [48679] (1)
      1. Moesin tail domain [48680]
        string of short helices masking the FERM domain surface
        1. Human (Homo sapiens) [TaxId: 9606] [48681] (1) picpic
  6. Proteinase A inhibitor IA3 [48686] (1)
    link to SUPERFAMILY database - Superfamily
    1. Proteinase A inhibitor IA3 [48687] (1)
      1. Proteinase A inhibitor IA3 [48688]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [48689] (3) picpic
  7. Epsilon subunit of mitochondrial F1F0-ATP synthase [48690] (1)
    link to SUPERFAMILY database - Superfamily
    1. Epsilon subunit of mitochondrial F1F0-ATP synthase [48691] (1)
      1. Epsilon subunit of mitochondrial F1F0-ATP synthase [48692]
        1. Cow (Bos taurus) [TaxId: 9913] [48693] (3) picpic
  8. Quinohemoprotein amine dehydrogenase C chain [69131] (1)
    link to SUPERFAMILY database - Superfamily
    1. Quinohemoprotein amine dehydrogenase C chain [69132] (2)
      1. Quinohemoprotein amine dehydrogenase C chain [69133]
        1. Paracoccus denitrificans [TaxId: 266] [69134] (2) picpic
        2. Pseudomonas putida [TaxId: 303] [69135] (2) picpic
  9. Stathmin [101494] (1)
    single long helix crosslinking four tubulin subunits
    link to SUPERFAMILY database - Superfamily
    1. Stathmin [101495] (1)
      1. Stathmin 4 [101496]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [101497] (5) picpic
  10. Anti-sigma factor FlgM [101498] (1)
    link to SUPERFAMILY database - Superfamily
    1. Anti-sigma factor FlgM [101499] (1)
      1. Anti-sigma factor FlgM [101500]
        1. Aquifex aeolicus [TaxId: 63363] [101501] (2) picpic
  11. Glu-tRNAGln amidotransferase C subunit [141000] (1)
    link to SUPERFAMILY database - Superfamily
    1. Glu-tRNAGln amidotransferase C subunit [141001] (1)
      Pfam 02686
      1. Glu-tRNAGln amidotransferase C subunit, GatC [141002]
        1. Staphylococcus aureus [TaxId: 1280] [141003] (5) picpic
          SQ P68807 2-100
  12. RelB-like [141004] (1)
    wraps around RelE subunit
    link to SUPERFAMILY database - Superfamily
    1. RelB-like [141005] (1)
      1. Hypothetical protein PHS014 [141006]
        1. Pyrococcus horikoshii [TaxId: 53953] [141007] (2) picpic
          SQ O73967 7-67
  13. Lag-3 N-terminal region [158851] (1)
    long kinked helix, part of the CSL-Notch-Mastermind ternary complex
    1. Lag-3 N-terminal region [158852] (1)
      1. Abnormal cell lineage protein 3, Lag-3 [158853]
        1. Caenorhabditis elegans [TaxId: 6239] [158854] (1) picpic
          SQ Q09260 52-114
  14. Lipase chaperone-like [158855] (1)
    open single layer scaffold of 11 helices, which engulfs the substrate protein
    1. Lipase chaperone LifO-like [158856] (1)
      Pfam 03280
      1. Lipase chaperone LifO (LipB) [158857]
        1. Burkholderia glumae [TaxId: 337] [158858] (2) picpic
          SQ Q05490 73-352
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk