Structural Classification of Proteins
Fold: Non-globular all-alpha subunits of globular proteins
not a true fold
Lineage:
Root:
scop
Class:
All alpha proteins
[46456]
Fold:
Non-globular all-alpha subunits of globular proteins
[48661]
not a true fold
Superfamilies:
Ribosomal protein L39e
[48662] (1)
interrupted alpha-helix
uperfamily
Ribosomal protein L39e
[48663] (1)
Ribosomal protein L39e [48664]
Archaeon Haloarcula marismortui
[TaxId: 2238]
[48665] (58)
SQ
P22452
1vqo
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
region 2:1-49
[144429]
3cc2
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
region 2:1-49
[156170]
1vq8
automatically matched to 1VQ4 2:1-49
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region 2:1-49
[144417]
1vqp
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region 2:1-49
[144431]
1jj2
complexed with cd, cl, k, mg, na
chain 1
[63082]
1s72
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
chain 2
[111599]
1vqk
automatically matched to 1VQ4 2:1-49
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
region 2:1-49
[144421]
1vql
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
region 2:1-49
[144423]
1vqm
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region 2:1-49
[144425]
1yhq
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
region 2:1-49
[144636]
3ccm
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
region 2:1-49
[156333]
1vqn
automatically matched to 1VQ4 2:1-49
complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
region 2:1-49
[144427]
3cc7
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
region 2:1-49
[156221]
1yi2
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
region 2:1-49
[144638]
1yij
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
region 2:1-49
[144642]
3ccu
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
region 2:1-49
[156429]
1vq7
automatically matched to 1VQ4 2:1-49
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
region 2:1-49
[144415]
3cce
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
region 2:1-49
[156261]
3ccl
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
region 2:1-49
[156309]
1vq4
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
region 2:1-49
[144409]
1vq5
automatically matched to 1VQ4 2:1-49
complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
region 2:1-49
[144411]
1vq9
automatically matched to 1VQ4 2:1-49
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region 2:1-49
[144419]
2otl
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
region 2:1-49
[145729]
3ccv
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
region 2:1-49
[156453]
3cpw
automatically matched to 1VQ4 2:1-49
complexed with ace, cd, cl, k, mg, na, sr, zld; mutant
region 1:1-49
[156904]
1m90
complexed with aca, cd, cl, k, mg, na, pha, sps
chain 3
[78837]
1vq6
automatically matched to 1VQ4 2:1-49
complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
region 2:1-49
[144413]
1yit
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
region 2:1-49
[144644]
3cc4
automatically matched to 1VQ4 2:1-49
complexed with 1ma, anm, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
region 2:1-49
[156197]
3ccq
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
region 2:1-49
[156357]
3cd6
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3; mutant
region 2:1-49
[156477]
2otj
automatically matched to 1VQ4 2:1-49
complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
region 2:1-49
[145727]
3ccs
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
region 2:1-49
[156405]
3cma
automatically matched to 1VQ4 2:1-49
complexed with 1ma, 8an, aca, cd, cl, k, mg, na, omg, omu, phe, psu, sr, ur3
region 2:1-49
[156773]
1nji
complexed with cd, cl, clm, k, mg, na; mutant
chain 3
[85790]
1yjw
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
region 2:1-49
[144652]
2qex
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, neg, omg, omu, psu, ur3
region 2:1-49
[150689]
3ccr
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
region 2:1-49
[156381]
1kqs
complexed with aca, btn, cd, cl, k, mg, na, pha, ppu
chain 1
[68812]
3ccj
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
region 2:1-49
[156285]
1kc8
complexed with bls, cd, cl, k, mg, na
chain 3
[84354]
1yjn
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
region 2:1-49
[144650]
1n8r
complexed with cd, cl, k, mg, na, vir; mutant
chain 3
[85426]
1k73
complexed with anm, cd, cl, k, mg, na
chain 3
[84315]
1qvg
complexed with cd, cl, k, mg, na
chain 1
[96389]
1q82
complexed with cd, cl, k, mg, na, ppu
chain 3
[96126]
1qvf
complexed with cd, cl, k, mg, na
chain 1
[96359]
1yj9
automatically matched to 1VQ4 2:1-49
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
region 2:1-49
[144646]
1q81
complexed with cd, cl, k, mg, na, ppu
chain 3
[96096]
1kd1
complexed with cd, cl, k, mg, na, spr
chain 3
[72321]
1k9m
complexed with cd, cl, k, mg, na, tyk
chain 3
[72210]
1k8a
complexed with cai, cd, cl, k, mg, na
chain 3
[72143]
1m1k
complexed with cd, cl, k, mg, na, zit
chain 3
[74381]
3cme
automatically matched to 1VQ4 2:1-49
complexed with 1ma, 8an, aca, cd, cl, k, mg, na, omg, omu, phe, psu, sr, ur3
region 2:1-49
[156809]
1q86
complexed with cd, cl, k, mg, na, pha
chain 3
[96164]
2qa4
automatically matched to 1VQ4 2:1-49
complexed with cd, cl, k, mg, na, omg, omu, psu, ur3
region 2:1-49
[150174]
1q7y
complexed with cd, cl, k, mg, na, po4, puy
chain 3
[96062]
1ffk
complexed with cd, k, mo3; mutant
chain y
[19624]
Methanol dehydrogenase subunit
[48666] (1)
consists of single alpha-helix and irregular N-terminal tail
uperfamily
Methanol dehydrogenase subunit
[48667] (3)
Methanol dehydrogenase, light chain [48668]
Methylophilus methylotrophus, w3a1
[TaxId: 17]
[48669] (8)
2ad6
automatically matched to d4aahb_
complexed with ca, pqq
region b:1-69
[126569]
2ad6
automatically matched to d4aahb_
complexed with ca, pqq
region d:1-69
[126571]
2ad7
automatically matched to d4aahb_
complexed with ca, pqq
region b:1-69
[126573]
2ad7
automatically matched to d4aahb_
complexed with ca, pqq
region d:1-69
[126575]
2ad8
automatically matched to d4aahb_
complexed with ca, pqq
region b:1-69
[126577]
2ad8
automatically matched to d4aahb_
complexed with ca, pqq
region d:1-69
[126579]
1g72
complexed with ca, pqq
chain b
[19627]
chain d
[19628]
4aah
complexed with ca, pqq
chain b
[19625]
chain d
[19626]
Methylobacterium extorquens
[TaxId: 408]
[63633] (3)
SQ
P14775
1w6s
complexed with ca, gol, pqq
chain b
[114285]
chain d
[114287]
1h4i
complexed with ca, pqq
chain b
[60587]
chain d
[60589]
1h4j
complexed with ca, pqq; mutant
chain b
[60591]
chain d
[60593]
chain f
[60595]
chain h
[60597]
Paracoccus denitrificans
[TaxId: 266]
[101493] (1)
1lrw
complexed with ca, pqq
chain b
[91112]
chain d
[91114]
Transducin (heterotrimeric G protein), gamma chain
[48670] (1)
long alpha-helix interrupted in the middle
uperfamily
Transducin (heterotrimeric G protein), gamma chain
[48671] (2)
Transducin (heterotrimeric G protein), gamma chain [48672]
Cow (Bos taurus)
[TaxId: 9913]
[48673] (11)
1tbg
chain e
[19630]
chain f
[19631]
chain g
[19632]
chain h
[19633]
2trc
complexed with gd
chain g
[19634]
1a0r
complexed with ace, far
chain g
[19639]
1gg2
complexed with gdp; mutant
chain g
[19636]
1b9y
complexed with gd
chain b
[19637]
1gp2
complexed with gdp; mutant
chain g
[19635]
1omw
complexed with cmt; mutant
chain g
[87090]
1b9x
complexed with gd; mutant
chain b
[19638]
1xhm
automatically matched to d1gg2g_
region b:8-52
[122006]
2bcj
automatically matched to d1omwg_
complexed with ace, alf, gdp, mg; mutant
region g:8-67
[128290]
1got
complexed with gdp
chain g
[19629]
Homo sapiens
[TaxId: 9606]
[158850] (1)
2qns
automatically matched to d1omwg_
complexed with so4
region b:10-62
[150954]
Fe-only hydrogenase smaller subunit
[48674] (1)
uperfamily
Fe-only hydrogenase smaller subunit
[48675] (1)
Fe-only hydrogenase smaller subunit [48676]
string of short helices wrapped around the larger subunit
Desulfovibrio desulfuricans
[TaxId: 876]
[48677] (1)
1hfe
complexed with cmo, cyn, fcy, fe2, fs4, pdt, zn
chain s
[19640]
chain t
[19641]
Moesin tail domain
[48678] (1)
uperfamily
Moesin tail domain
[48679] (1)
Moesin tail domain [48680]
string of short helices masking the FERM domain surface
Human (Homo sapiens)
[TaxId: 9606]
[48681] (1)
1ef1
complexed with so4
chain c
[19642]
chain d
[19643]
Proteinase A inhibitor IA3
[48686] (1)
uperfamily
Proteinase A inhibitor IA3
[48687] (1)
Proteinase A inhibitor IA3 [48688]
Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]
[48689] (3)
1dpj
complexed with man, nag, so4
chain b
[19645]
1g0v
complexed with man, nag; mutant
chain b
[60190]
1dp5
complexed with man, nag; mutant
chain b
[19646]
Epsilon subunit of mitochondrial F1F0-ATP synthase
[48690] (1)
uperfamily
Epsilon subunit of mitochondrial F1F0-ATP synthase
[48691] (1)
Epsilon subunit of mitochondrial F1F0-ATP synthase [48692]
Cow (Bos taurus)
[TaxId: 9913]
[48693] (3)
2v7q
automatically matched to d1e79i_
complexed with adp, atp, mg, po4
region i:1-47
[152735]
1e79
complexed with adp, atp, cry, glh, mg, so4
chain i
[19647]
1h8e
disordered
complexed with adp, alf, gol, mg, so4
chain i
[60758]
Quinohemoprotein amine dehydrogenase C chain
[69131] (1)
uperfamily
Quinohemoprotein amine dehydrogenase C chain
[69132] (2)
Quinohemoprotein amine dehydrogenase C chain [69133]
Paracoccus denitrificans
[TaxId: 266]
[69134] (2)
1pby
complexed with hem, tbu, trw
chain c
[94423]
1jju
complexed with hem, na, tbu, trq
chain c
[66780]
Pseudomonas putida
[TaxId: 303]
[69135] (2)
1jmx
complexed with hec, ni, trq
chain g
[66907]
1jmz
complexed with hec, ni, pnd, trq
chain g
[66914]
Stathmin
[101494] (1)
single long helix crosslinking four tubulin subunits
uperfamily
Stathmin
[101495] (1)
Stathmin 4 [101496]
Rat (Rattus norvegicus)
[TaxId: 10116]
[101497] (5)
1sa0
complexed with cn2, gdp, gtp, mg
chain e
[98777]
1z2b
automatically matched to d1sa0e_
complexed with cn2, gdp, gtp, mg, vlb
region e:4-141
[124375]
3e22
automatically matched to d1sa0e_
complexed with gdp, gtp, loc, mg, tzt
region e:4-141
[157987]
1sa1
complexed with gdp, gtp, mg, pod
chain e
[98786]
3du7
automatically matched to d1sa0e_
complexed with cn2, gdp, gtp, hos, mg
region e:4-141
[157864]
Anti-sigma factor FlgM
[101498] (1)
uperfamily
Anti-sigma factor FlgM
[101499] (1)
Anti-sigma factor FlgM [101500]
Aquifex aeolicus
[TaxId: 63363]
[101501] (2)
1rp3
chain b
[97681]
chain d
[97685]
chain f
[97689]
chain h
[97693]
1sc5
chain b
[98801]
Glu-tRNAGln amidotransferase C subunit
[141000] (1)
uperfamily
Glu-tRNAGln amidotransferase C subunit
[141001] (1)
Pfam 02686
Glu-tRNAGln amidotransferase C subunit, GatC [141002]
Staphylococcus aureus
[TaxId: 1280]
[141003] (5)
SQ
P68807
2-100
2f2a
automatically matched to 2DF4 C:2-100
complexed with gln, mg
region c:3-94
[132804]
2g5h
automatically matched to 2DF4 C:2-100
complexed with mg
region c:2-100
[134661]
2dqn
automatically matched to 2DF4 C:2-100
complexed with asn, mg
region c:3-100
[131642]
2df4
complexed with mn
region c:2-100
[131448]
2g5i
automatically matched to 2DF4 C:2-100
complexed with adp, mg
region c:3-100
[134665]
RelB-like
[141004] (1)
wraps around RelE subunit
uperfamily
RelB-like
[141005] (1)
Hypothetical protein PHS014 [141006]
Pyrococcus horikoshii
[TaxId: 53953]
[141007] (2)
SQ
O73967
7-67
1wmi
region b:7-67
[121046]
1wmi
automatically matched to 1WMI B:7-67
region d:7-67
[121048]
Lag-3 N-terminal region
[158851] (1)
long kinked helix, part of the CSL-Notch-Mastermind ternary complex
Lag-3 N-terminal region
[158852] (1)
Abnormal cell lineage protein 3, Lag-3 [158853]
Caenorhabditis elegans
[TaxId: 6239]
[158854] (1)
SQ
Q09260
52-114
2fo1
region d:52-114
[145175]
Lipase chaperone-like
[158855] (1)
open single layer scaffold of 11 helices, which engulfs the substrate protein
Lipase chaperone LifO-like
[158856] (1)
Pfam 03280
Lipase chaperone LifO (LipB) [158857]
Burkholderia glumae
[TaxId: 337]
[158858] (2)
SQ
Q05490
73-352
2es4
complexed with ca, iod
region d:53-332
[145122]
2es4
automatically matched to 2ES4 D:53-332
complexed with ca, iod
region e:53-330
[145123]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk