Structural Classification of Proteins
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Family: Isoprenyl diphosphate synthases

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Terpenoid synthases [48575]
    multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers
  4. Superfamily: Terpenoid synthases [48576]
    duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J
    link to SUPERFAMILY database - Superfamily
  5. Family: Isoprenyl diphosphate synthases [48577]

Protein Domains:

  1. Farnesyl diphosphate synthase (geranyltranstransferase) [48578]
    1. Chicken (Gallus gallus) [TaxId: 9031] [48579] (5)
      1. 1fps picpic
        1. chain a [19436] picpiclink
      2. 1uby picpic
        complexed with dma, mg; mutant
        1. chain a [19435] picpiclink
      3. 1ubv picpic
        mutant
        1. chain a [19437] picpiclink
      4. 1ubw picpic
        complexed with gpp, mg; mutant
        1. chain a [19438] picpiclink
      5. 1ubx picpic
        complexed with fpp, mg; mutant
        1. chain a [19439] picpiclink
    2. Escherichia coli [TaxId: 562] [101453] (2)
      1. 1rqj picpic
        complexed with ipr, mg, ris
        1. chain a [97744] picpiclink
        2. chain b [97745] picpiclink
      2. 1rqi picpic
        complexed with dpo, dst, ipr, mg
        1. chain a [97742] picpiclink
        2. chain b [97743] picpiclink
    3. Staphylococcus aureus [TaxId: 1280] [101454] (1)
      1. 1rtr picpic
        1. chain a [97820] picpiclink
        2. chain b [97821] picpiclink
  2. Octoprenyl-diphosphate synthase [101455]
    1. Thermotoga maritima [TaxId: 2336] [101456] (10)
      SQ Q9X1M1
      1. 1v4e picpic
        complexed with so4
        1. chain a [100296] picpiclink
        2. chain b [100297] picpiclink
      2. 1v4i picpic
        complexed with so4; mutant
        1. chain a [100299] picpiclink
      3. 1v4k picpic
        complexed with so4; mutant
        1. chain a [100302] picpiclink
      4. 1vg3 picpic
        complexed with so4; mutant
        1. chain a [108601] picpiclink
      5. 1v4h picpic
        complexed with so4; mutant
        1. chain a [100298] picpiclink
      6. 1v4j picpic
        complexed with so4; mutant
        1. chain a [100300] picpiclink
        2. chain b [100301] picpiclink
      7. 1vg6 picpic
        mutant
        1. chain a [108604] picpiclink
      8. 1vg2 picpic
        mutant
        1. chain a [108600] picpiclink
      9. 1vg7 picpic
        mutant
        1. chain a [108605] picpiclink
      10. 1vg4 picpic
        mutant
        1. chain a [108602] picpiclink
        2. chain b [108603] picpiclink
  3. Geranylgeranyl pyrophosphate synthetase [158813]
    1. Human (Homo sapiens) [TaxId: 9606] [158814] (6)
      SQ O95749 6-296
      1. 2q80 picpic
        complexed with grg, mg
        1. region a:6-296 [150112] picpiclink
      2. 2q80 picpic
        automatically matched to 2Q80 A:6-296
        complexed with grg, mg
        1. region b:6-295 [150113] picpiclink
      3. 2q80 picpic
        automatically matched to 2Q80 A:6-296
        complexed with grg, mg
        1. region c:6-295 [150114] picpiclink
      4. 2q80 picpic
        automatically matched to 2Q80 A:6-296
        complexed with grg, mg
        1. region d:6-295 [150115] picpiclink
      5. 2q80 picpic
        automatically matched to 2Q80 A:6-296
        complexed with grg, mg
        1. region e:6-295 [150116] picpiclink
      6. 2q80 picpic
        automatically matched to 2Q80 A:6-296
        complexed with grg, mg
        1. region f:6-295 [150117] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk