Structural Classification of Proteins
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Fold: Terpenoid synthases

multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Terpenoid synthases [48575]
    multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

Superfamilies:

  1. Terpenoid synthases [48576] (5)
    duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J
    link to SUPERFAMILY database - Superfamily
    1. Isoprenyl diphosphate synthases [48577] (5)
      1. Farnesyl diphosphate synthase (geranyltranstransferase) [48578]
        1. Chicken (Gallus gallus) [TaxId: 9031] [48579] (5) picpic
        2. Escherichia coli [TaxId: 562] [101453] (2) picpic
        3. Staphylococcus aureus [TaxId: 1280] [101454] (1) picpic
      2. Octoprenyl-diphosphate synthase [101455]
        1. Thermotoga maritima [TaxId: 2336] [101456] (10) picpic
          SQ Q9X1M1
      3. Geranylgeranyl pyrophosphate synthetase [158813]
        1. Human (Homo sapiens) [TaxId: 9606] [158814] (6) picpic
          SQ O95749 6-296
    2. Squalene synthase [48580] (1)
      1. Squalene synthase [48581]
        synonym: Farnesyl diphosphate farnesyltransferase
        1. Human (Homo sapiens) [TaxId: 9606] [48582] (1) picpic
    3. Terpenoid cyclase C-terminal domain [48583] (2)
      1. 5-Epi-aristolochene synthase [48584]
        1. Tobacco (Nicotiana tabacum) [TaxId: 4097] [48585] (7) picpic
      2. (+)-bornyl diphosphate synthase [81920]
        1. Garden sage (Salvia officinalis) [TaxId: 38868] [81921] (7) picpic
    4. Aristolochene/pentalenene synthase [48586] (2)
      1. Aristolochene synthase [48587]
        1. Fungus (Penicillium roqueforti) [TaxId: 5082] [48588] (2) picpic
      2. Pentalenene synthase [48589]
        1. Streptomyces sp., UC5319 [TaxId: 1931] [48590] (3) picpic
    5. Trichodiene synthase [69113] (1)
      1. Trichodiene synthase [69114]
        1. Fusarium sporotrichioides [TaxId: 5514] [69115] (12) picpic

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
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