Structural Classification of Proteins
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Superfamily: Triger factor/SurA peptide-binding domain-like

there are sequence and functional similarities between the families, but their structural similarity is obscured by conformational flexibility (in the TF family)
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Triger factor/SurA peptide-binding domain-like [109997]
    multihelical; irregular array of long and short helices
  4. Superfamily: Triger factor/SurA peptide-binding domain-like [109998]
    there are sequence and functional similarities between the families, but their structural similarity is obscured by conformational flexibility (in the TF family)
    link to SUPERFAMILY database - Superfamily

Families:

  1. TF C-terminus [109999] (2)
    Pfam 05698; includes the upstream linker region not covered by the Pfam model
    1. Trigger factor, C-terminal domain [110000]
      1. Escherichia coli [TaxId: 562] [110001] (2)
        SQ P22257
        1. 1w26 picpicxrefxref
          1. region a:248-432 [109085] picpiclink
          2. region b:248-432 [109088] picpiclink
        2. 2vrh picpicxrefxrefxrefxrefxref
          automatically matched to d1w26a1
          1. region a:248-431 [153506] picpiclink
      2. Vibrio cholerae [TaxId: 666] [110002] (1)
        SQ Q9KQS5
        1. 1t11 picpicxrefxref
          1. region a:248-376 [106236] picpiclink
          2. region b:248-376 [106239] picpiclink
  2. Porin chaperone SurA, peptide-binding domain [81828] (1)
    1. Porin chaperone SurA, peptide-binding domain [81829]
      1. Escherichia coli [TaxId: 562] [81830] (3)
        1. 1m5y picpicxref
          1. region a:25-164,a:395-427 [78664] picpiclink
          2. region b:25-163,b:396-427 [78667] picpiclink
          3. region c:25-163,c:396-427 [78670] picpiclink
          4. region d:25-163,d:396-428 [78673] picpiclink
        2. 2pv3 picpicxrefxref
          automatically matched to d1m5yd1
          1. region a:25-163,a:396-427 [149882] picpiclink
        3. 2pv3 picpicxrefxref
          automatically matched to d1m5yd1
          1. region b:25-163,b:396-427 [149884] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk