Structural Classification of Proteins

Superfamily: TPR-like

: uperfamily

Lineage:

Root: scop
Class: All alpha proteins [46456]
Fold: alpha-alpha superhelix [48370]
multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
Superfamily: TPR-like [48452]
uperfamily

Families:

Tetratricopeptide repeat (TPR) [48453] (20)
1. Protein phosphatase 5 [48454]
  1. Human (Homo sapiens) [TaxId: 9606] [48455] (6)
2. Hop [48456]
  1. Human (Homo sapiens) [TaxId: 9606] [48457] (2)
3. Vesicular transport protein sec17 [48458]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [48459] (1)
4. Neutrophil cytosolic factor 2 (NCF-2, p67-phox) [48460]
  1. Human (Homo sapiens) [TaxId: 9606] [48461] (3)
5. Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) [48462]
  1. Human (Homo sapiens) [TaxId: 9606] [48463] (6)
  2. Trypanosoma brucei [TaxId: 5691] [63617] (1)
6. Cyclophilin 40 [63618]
  1. Cow (Bos taurus) [TaxId: 9913] [63619] (2)
7. FKBP51, C-terminal domain [81905]
  1. Human (Homo sapiens) [TaxId: 9606] [81906] (1)
  2. Monkey (Saimiri boliviensis) [TaxId: 27679] [81907] (1)
8. Hypothetical protein RSGI Ruh-001 [81908]
  a Fis1p-like and Cgi-135 homologous domain
  1. Mouse (Mus musculus) [TaxId: 10090] [81909] (1)
9. Mitochondria fission protein Fis1 [101417]
  1. Human (Homo sapiens) [TaxId: 9606] [101418] (2)
  2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [140836] (3)
    SQ P40515 1-138
10. FKBP52 (FKBP4), C-terminal domain [109971]
  1. Human (Homo sapiens) [TaxId: 9606] [109972] (2)
    SQ Q02790 145-427
11. O-GlcNAc transferase p110 subunit, OGT [109973]
  1. Human (Homo sapiens) [TaxId: 9606] [109974] (1)
    SQ O15294 16-400
12. Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 [117007]
  1. Human (Homo sapiens) [TaxId: 9606] [117008] (1)
    SQ P13674 161-254
13. Lipoprotein NlpI [117009]
  1. Escherichia coli [TaxId: 562] [117010] (1)
    SQ P39833 26-294
14. STIP1 homology and U box-containing protein 1, STUB1 [140837]
  1. Mouse (Mus musculus) [TaxId: 10090] [140838] (4)
    SQ Q9WUD1 24-224
15. Mitochondrial import receptor subunit tom20-3 [140839]
  1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [140840] (1)
    SQ P82874 1-145
16. Putative 70 kda peptidylprolyl isomerase PFL2275c [140841]
  1. Plasmodium falciparum [TaxId: 5833] [140842] (2)
    SQ Q8I4V8 128-280
17. SMG-7 [140843]
  1. Human (Homo sapiens) [TaxId: 9606] [140844] (2)
    SQ Q92540 1-497
Transcription factor MalT domain III [69094] (1)
1. Transcription factor MalT domain III [69095]
  1. Escherichia coli [TaxId: 562] [69096] (1)
BTAD-like [140845] (1)
Pfam 03704; Bacterial transcriptional activator domain
1. Probable regulatory protein EmbR, middle domain [140846]
  1. Mycobacterium tuberculosis [TaxId: 1773] [140847] (3)
    SQ P66799 105-283
PrgX C-terminal domain-like [140848] (1)
1. PrgX [140849]
  1. Enterococcus faecalis [TaxId: 1351] [140850] (40)
    SQ Q04114 70-287! SQ Q04114 71-301
Atu0120-like [158772] (1)
Pfam 06041; DUF924
1. Hypothetical protein Atu0120 [158773]
  1. Agrobacterium tumefaciens [TaxId: 358] [158774] (2)
    SQ Q8UJ18 1-179
SusD-like [158775] (3)
TPR-like structure resides in the N-terminal part; the C-terminal part is structurally unique and is covered by Pfam 07980
1. Uncharacterized protein BT3984 [158776]
  1. Bacteroides thetaiotaomicron [TaxId: 818] [158777] (1)
    SQ Q8A0N7 31-537
2. Uncharacterized protein BF3025 [158778]
  1. Bacteroides fragilis [TaxId: 817] [158779] (1)
    SQ Q5LB02 32-490
3. Starch utilization system protein SusD [158780]
  1. Bacteroides thetaiotaomicron [TaxId: 818] [158781] (12)
    SQ Q8A1G2 42-551
HAT/Suf repeat [158782] (1)
includes Pfam 05843
1. Cleavage stimulation factor 77 kDa subunit CSTF3 [158783]
  1. Mouse (Mus musculus) [TaxId: 10090] [158784] (3)
    SQ Q99LI7 21-549! SQ Q99LI7 242-549
CT2138-like [158785] (1)
probable biological unit is a homohexamer
1. Hypothetical protein CT2138 [158786]
  1. Chlorobium tepidum [TaxId: 1097] [158787] (6)
    SQ Q8KAL8 2-157