Structural Classification of Proteins
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Fold: post-AAA+ oligomerization domain-like

core: 5 helices: bundle

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: post-AAA+ oligomerization domain-like [48018]
    core: 5 helices: bundle

Superfamilies:

  1. post-AAA+ oligomerization domain-like [48019] (2)
    associated with N-terminal domain from the AAA+ family of P-loop hydrolases
    link to SUPERFAMILY database - Superfamily
    1. DNA polymerase III clamp loader subunits, C-terminal domain [48020] (10)
      contains an extra helix
      1. gamma subunit [63578]
        1. Escherichia coli [TaxId: 562] [63579] (3) picpic
          SQ P06710 5-368
        2. Thermotoga maritima [TaxId: 2336] [140678] (1) picpic
          SQ Q9WZM9 209-306
      2. delta prime subunit [48021]
        1. Escherichia coli [TaxId: 562] [48022] (4) picpic
          SQ P28631
      3. delta subunit [63580]
        1. Escherichia coli [TaxId: 562] [63581] (4) picpic
          SQ P28630
      4. Replication factor C [63582]
        1. Archaeon Pyrococcus furiosus [TaxId: 2261] [63583] (1) picpic
      5. Replication factor C1 [109894]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109895] (1) picpic
          SQ P38630 295-696 # helical segment (667-696) together with unassigned C-terminal sequence forms an all-alpha subdomain
      6. Replication factor C4 [109896]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109897] (1) picpic
          SQ P40339
      7. Replication factor C3 [109898]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109899] (1) picpic
          SQ P38629
      8. Replication factor C2 [109900]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109901] (1) picpic
          SQ P40348
      9. Replication factor C5 [109902]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109903] (1) picpic
          SQ P38251
    2. MgsA/YrvN C-terminal domain-like [158600] (3)
      1. Uncharacterized protein NTHI1458 [158601]
        1. Haemophilus influenzae [TaxId: 727] [158602] (2) picpic
          SQ Q4QL22 251-434
      2. Uncharacterized protein EfaeDRAFT_0938 [158603]
        1. Enterococcus faecium [TaxId: 1352] [158604] (20) picpic
          SQ Q3XY27 238-423! SQ Q3XY27 241-328
      3. Uncharacterized protein YrvN [158605]
        1. Prochlorococcus marinus [TaxId: 1219] [158606] (2) picpic
          SQ Q7V3J8 258-420
          PMM0077
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk