Family: RNase III catalytic domain-like

Pfam 00636

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]
3. Fold: RNase III domain-like [69064]
   core: 5 helices; one helix is surrounded by the others
4. Superfamily: RNase III domain-like [69065]
   uperfamily
5. Family: RNase III catalytic domain-like [69066]
   Pfam 00636

Protein Domains:

1. RNase III endonuclease catalytic domain [69067]
   1. Thermotoga maritima [TaxId: 2336] [81817] (1)
      1. 1o0w
         CASP5
         1. region a:-1-167 [80751]
         2. region b:-1-167 [80753]
   2. Aquifex aeolicus [TaxId: 63363] [69068] (22)
      1. 2nug
         automatically matched to d1rc7a1
         complexed with mg
         1. region a:3-150 [148452]
      2. 2nug
         automatically matched to d1rc7a1
         complexed with mg
         1. region b:3-150 [148454]
      3. 2ez6
         automatically matched to d1rc7a1
         complexed with mg; mutant
         1. region a:3-150 [132616]
      4. 2ez6
         automatically matched to d1rc7a1
         complexed with mg; mutant
         1. region b:3-150 [132618]
      5. 1rc7
         complexed with trs; mutant
         1. region a:1-150 [97289]
      6. 1yz9
         automatically matched to d1rc7a1
         complexed with so4; mutant
         1. region a:1-150 [124271]
      7. 1yz9
         automatically matched to d1rc7a1
         complexed with so4; mutant
         1. region b:3-150 [124273]
      8. 1yyk
         automatically matched to d1rc7a1
         complexed with trs
         1. region a:1-150 [124218]
      9. 1yyk
         automatically matched to d1rc7a1
         complexed with trs
         1. region b:1-150 [124220]
      10. 2nuf
          automatically matched to d1rc7a1
          complexed with mg
          1. region a:2-150 [148448]
      11. 2nuf
          automatically matched to d1rc7a1
          complexed with mg
          1. region b:2-150 [148450]
      12. 1jfz
          complexed with mn
          1. chain a [66655]
          2. chain b [66656]
          3. chain c [66657]
          4. chain d [66658]
      13. 1i4s
          1. chain a [66026]
          2. chain b [66027]
      14. 1yyo
          automatically matched to d1rc7a1
          complexed with trs; mutant
          1. region a:1-150 [124244]
      15. 1yyo
          automatically matched to d1rc7a1
          complexed with trs; mutant
          1. region b:2-150 [124246]
      16. 1rc5
          complexed with mg
          1. chain a [97283]
          2. chain b [97284]
          3. chain c [97285]
          4. chain d [97286]
      17. 2nue
          automatically matched to d1rc7a1
          1. region a:2-150 [148444]
      18. 2nue
          automatically matched to d1rc7a1
          1. region b:2-150 [148446]
      19. 1yyw
          automatically matched to d1rc7a1
          1. region a:2-150 [124256]
      20. 1yyw
          automatically matched to d1rc7a1
          1. region b:2-150 [124258]
      21. 1yyw
          automatically matched to d1rc7a1
          1. region c:2-150 [124260]
      22. 1yyw
          automatically matched to d1rc7a1
          1. region d:2-150 [124262]
2. Hypothetical protein BC0111 [109892]
   1. Bacillus cereus [TaxId: 1396] [109893] (1)
      SQ Q81J58
      1. 1u61
         Structural genomics target
         1. chain a [107696]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk