Structural Classification of Proteins
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Superfamily: RNase III domain-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: RNase III domain-like [69064]
    core: 5 helices; one helix is surrounded by the others
  4. Superfamily: RNase III domain-like [69065]
    link to SUPERFAMILY database - Superfamily

Families:

  1. RNase III catalytic domain-like [69066] (3)
    Pfam 00636
    1. RNase III endonuclease catalytic domain [69067]
      1. Thermotoga maritima [TaxId: 2336] [81817] (1) picpic
      2. Aquifex aeolicus [TaxId: 63363] [69068] (22) picpic
    2. Hypothetical protein BC0111 [109892]
      1. Bacillus cereus [TaxId: 1396] [109893] (1) picpic
        SQ Q81J58
  2. PF0609-like [140675] (1)
    specific to Thermococci; shares conserved carboxylic residues and similar dimerisation mode with the RNase III domain; contains integrated in the fold extra C-terminal helix, making it similar to the core fold of Ribosomal protein S7 (scop_cf 47972)
    1. Hypothetical protein PF0609 [140676]
      SECSG target pfu-631545-001
      1. Pyrococcus furiosus [TaxId: 2261] [140677] (2) picpic
        SQ Q8U363 2-125
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk