Fold: RNase III domain-like

core: 5 helices; one helix is surrounded by the others

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]
3. Fold: RNase III domain-like [69064]
   core: 5 helices; one helix is surrounded by the others

Superfamilies:

1. RNase III domain-like [69065] (2)
   uperfamily
   1. RNase III catalytic domain-like [69066] (3)
      Pfam 00636
      1. RNase III endonuclease catalytic domain [69067]
         1. Thermotoga maritima [TaxId: 2336] [81817] (1)
         2. Aquifex aeolicus [TaxId: 63363] [69068] (22)
      2. Hypothetical protein BC0111 [109892]
         1. Bacillus cereus [TaxId: 1396] [109893] (1)
            SQ Q81J58
   2. PF0609-like [140675] (1)
      specific to Thermococci; shares conserved carboxylic residues and similar dimerisation mode with the RNase III domain; contains integrated in the fold extra C-terminal helix, making it similar to the core fold of Ribosomal protein S7 (scop_cf 47972)
      1. Hypothetical protein PF0609 [140676]
         SECSG target pfu-631545-001
         1. Pyrococcus furiosus [TaxId: 2261] [140677] (2)
            SQ Q8U363 2-125

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk