Structural Classification of Proteins
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Family: Transcription factor IIB (TFIIB), core domain

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Cyclin-like [47953]
    core: 5 helices; one helix is surrounded by the others
  4. Superfamily: Cyclin-like [47954]
    duplication: consists of two domains of this fold
    link to SUPERFAMILY database - Superfamily
  5. Family: Transcription factor IIB (TFIIB), core domain [47965]

Protein Domains:

  1. Transcription factor IIB (TFIIB), core domain [47966]
    1. Human (Homo sapiens) [TaxId: 9606] [47967] (5)
      1. 1vol picpicxref
        protein/DNA complex
        1. region a:113-207 [18370] picpiclink
        2. region a:208-316 [18371] picpiclink
      2. 1c9b picpicxref
        1. region a:110-207 [18372] picpiclink
        2. region a:208-316 [18373] picpiclink
        3. region e:110-207 [18374] picpiclink
        4. region e:208-316 [18375] picpiclink
        5. region i:110-207 [18376] picpiclink
        6. region i:208-316 [18377] picpiclink
        7. region m:110-207 [18378] picpiclink
        8. region m:208-316 [18379] picpiclink
        9. region q:110-207 [18380] picpiclink
        10. region q:208-316 [18381] picpiclink
      3. 2phg picpic
        automatically matched to d1c9ba1
        mutant
        1. region a:112-207 [139694] picpiclink
      4. 2phg picpic
        automatically matched to d1c9ba2
        mutant
        1. region a:208-316 [139695] picpiclink
      5. 1tfb picpic
        mutant
        1. region a:111-207 [18382] picpiclink
        2. region a:208-316 [18383] picpiclink
    2. Archaeon Pyrococcus woesei [TaxId: 2262] [47968] (2)
      1. 1ais picpicxref
        protein/DNA complex; complexed with 5iu
        1. region b:1108-1205 [18384] picpiclink
        2. region b:1206-1300 [18385] picpiclink
      2. 1d3u picpicxref
        1. region b:1100-1205 [18386] picpiclink
        2. region b:1206-1300 [18387] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk