Structural Classification of Proteins
home mail help root up expand collapse

Fold: Saposin-like

5 helices; folded leaf, closed

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Saposin-like [47861]
    5 helices; folded leaf, closed

Superfamilies:

  1. Saposin [47862] (4)
    Lipid-binding can promote conformational changes and oligomerisation in some members
    link to SUPERFAMILY database - Superfamily
    1. Saposin B [81806] (1)
      the alternative subunit conformation is an open four-helical bundle; helices 3 and 4 form a contiguous helix
      1. Saposin B [81807]
        1. Human (Homo sapiens) [TaxId: 9606] [81808] (1)
          1. 1n69 picpic
            the alternative subunit conformation
            complexed with peh
            1. chain a [80118] picpiclink
            2. chain b [80119] picpiclink
            3. chain c [80120] picpiclink
    2. NKL-like [47863] (3)
      1. NK-lysin, NKL [47864]
        1. Pig (Sus scrofa) [TaxId: 9823] [47865] (1)
          1. 1nkl picpic
            CASP2
            1. chain a [18140] picpiclink
      2. Granulysin, NKG5 protein [81809]
        1. Human (Homo sapiens) [TaxId: 9606] [81810] (1)
          1. 1l9l picpic
            complexed with eoh, mpo, so4
            1. chain a [77827] picpiclink
      3. Saposin C [89077]
        1. Human (Homo sapiens) [TaxId: 9606] [89078] (7)
          1. 2gtg picpic
            automatically matched to d1m12a_
            1. region a:2-79 [135649] picpiclink
          2. 2qyp picpic
            automatically matched to d1m12a_
            1. region a:1-78 [151477] picpiclink
          3. 2z9a picpic
            automatically matched to d1m12a_
            complexed with gol
            1. region a:2-78 [154235] picpiclink
          4. 2qyp picpic
            automatically matched to d1m12a_
            1. region b:1-78 [151478] picpiclink
          5. 2z9a picpic
            automatically matched to d1m12a_
            complexed with gol
            1. region b:2-78 [154236] picpiclink
          6. 1m12 picpic
            1. chain a [84745] picpiclink
          7. 1sn6 picpic
            automatically matched to d1m12a_
            1. region a:1-84 [118972] picpiclink
    3. Ameobapore A [101266] (1)
      1. Ameobapore A [101267]
        pore-forming toxin
        1. Entamoeba histolytica [TaxId: 5759] [101268] (1)
          1. 1of9 picpic
            1. chain a [92821] picpiclink
    4. Swaposin [47866] (1)
      circularly permuted saposin domain inserted in plant acid proteases
      1. (Pro)phytepsin [47867]
        1. Barley (Hordeum vulgare) [TaxId: 4513] [47868] (1)
          1. 1qdm picpicxref
            1. region a:1s-104s [18141] picpiclink
            2. region b:1s-104s [18142] picpiclink
            3. region c:1s-104s [18143] picpiclink
  2. Bacteriocin AS-48 [47869] (1)
    link to SUPERFAMILY database - Superfamily
    1. Bacteriocin AS-48 [47870] (1)
      1. Bacteriocin AS-48 [47871]
        cyclic peptide
        1. Enterococcus faecalis [TaxId: 1351] [47872] (4)
          1. 1o82 picpic
            complexed with gol, so4
            1. chain a [92630] picpiclink
            2. chain b [92631] picpiclink
            3. chain c [92632] picpiclink
            4. chain d [92633] picpiclink
          2. 1o83 picpic
            complexed with gol, po4
            1. chain a [92634] picpiclink
            2. chain b [92635] picpiclink
            3. chain c [92636] picpiclink
            4. chain d [92637] picpiclink
          3. 1o84 picpic
            complexed with d10, gol, mal, so4
            1. chain a [92638] picpiclink
            2. chain b [92639] picpiclink
          4. 1e68 picpic
            CASP4
            1. chain a [18144] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk