Structural Classification of Proteins

Family: Phycocyanin-like phycobilisome proteins

: oligomers of two different types of globin-like subunits containing two extra helices at the N-terminus
binds a bilin chromophore

Lineage:

Root: scop
Class: All alpha proteins [46456]
Fold: Globin-like [46457]
core: 6 helices; folded leaf, partly opened
Superfamily: Globin-like [46458]
uperfamily
Family: Phycocyanin-like phycobilisome proteins [46532]
oligomers of two different types of globin-like subunits containing two extra helices at the N-terminus
binds a bilin chromophore

Protein Domains:

Phycocyanin alpha subunit [88933]
1. Red alga (Cyanidium caldarium) [TaxId: 2771] [88934] (1)
  1. 1phn
    complexed with cyc
    1. chain a [15641]
2. Red alga (Polysiphonia urceolata) [TaxId: 65404] [88936] (1)
  1. 1f99
    complexed with cyc, peb
    1. chain a [59722]
    2. chain k [59724]
    3. chain m [59726]
3. Cyanobacterium (Fremyella diplosiphon) [TaxId: 1197] [88937] (1)
  1. 1cpc
    complexed with cyc, nma
    1. chain a [15643]
    2. chain k [15645]
4. Synechococcus vulcanus [TaxId: 32053] [88938] (3)
  1. 1ktp
    complexed with cyc, men
    1. chain a [72990]
  2. 1i7y
    complexed with cyc
    1. chain a [61917]
  3. 1on7
    complexed with cyc
    1. chain a [87121]
5. Synechococcus elongatus [TaxId: 32046] [88967] (1)
  1. 1jbo
    complexed with cyc, men
    1. chain a [84150]
6. Spirulina platensis [TaxId: 118562] [88939] (2)
  1. 1ha7
    complexed with cyc, men
    1. chain a [70935]
    2. chain c [70937]
    3. chain e [70939]
    4. chain g [70941]
    5. chain i [70943]
    6. chain k [70945]
    7. chain m [70947]
    8. chain o [70949]
    9. chain q [70951]
    10. chain s [70953]
    11. chain u [70955]
    12. chain w [70957]
  2. 1gh0
    complexed with cyc
    1. chain a [60491]
    2. chain c [60493]
    3. chain e [60495]
    4. chain g [60497]
    5. chain i [60499]
    6. chain k [60501]
    7. chain m [60503]
    8. chain o [60505]
    9. chain q [60507]
    10. chain s [60509]
    11. chain u [60511]
    12. chain w [60513]
7. Spirulina sp. [TaxId: 1157] [158219] (12)
  1. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region a:1-162 [152185]
  2. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region c:1-162 [152186]
  3. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region e:1-162 [152187]
  4. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region g:1-162 [152188]
  5. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region i:1-162 [152189]
  6. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region k:1-162 [152190]
  7. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region m:1-162 [152191]
  8. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region o:1-162 [152192]
  9. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region q:1-162 [152193]
  10. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region s:1-162 [152194]
  11. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region u:1-162 [152195]
  12. 2uum
    automatically matched to d1gh0a_
    complexed with bla, cyc
    1. region w:1-162 [152196]
Phycocyanin beta subunit [88940]
1. Red alga (Cyanidium caldarium) [TaxId: 2771] [88941] (1)
  1. 1phn
    complexed with cyc
    1. chain b [15642]
2. Red alga (Polysiphonia urceolata) [TaxId: 65404] [88942] (1)
  1. 1f99
    complexed with cyc, peb
    1. chain b [59723]
    2. chain l [59725]
    3. chain n [59727]
3. Cyanobacterium (Fremyella diplosiphon) [TaxId: 1197] [88943] (1)
  1. 1cpc
    complexed with cyc, nma
    1. chain b [15644]
    2. chain l [15646]
4. Synechococcus vulcanus [TaxId: 32053] [88944] (3)
  1. 1ktp
    complexed with cyc, men
    1. chain b [72991]
  2. 1i7y
    complexed with cyc
    1. chain b [61918]
  3. 1on7
    complexed with cyc
    1. chain b [87122]
5. Synechococcus elongatus [TaxId: 32046] [88968] (1)
  1. 1jbo
    complexed with cyc, men
    1. chain b [84151]
6. Spirulina platensis [TaxId: 118562] [88952] (2)
  1. 1ha7
    complexed with cyc, men
    1. chain b [70936]
    2. chain d [70938]
    3. chain f [70940]
    4. chain h [70942]
    5. chain j [70944]
    6. chain l [70946]
    7. chain n [70948]
    8. chain p [70950]
    9. chain r [70952]
    10. chain t [70954]
    11. chain v [70956]
    12. chain x [70958]
  2. 1gh0
    complexed with cyc
    1. chain b [60492]
    2. chain d [60494]
    3. chain f [60496]
    4. chain h [60498]
    5. chain j [60500]
    6. chain l [60502]
    7. chain n [60504]
    8. chain p [60506]
    9. chain r [60508]
    10. chain t [60510]
    11. chain v [60512]
    12. chain x [60514]
Allophycocyanin alpha subunit [88953]
1. Spirulina platensis [TaxId: 118562] [88954] (1)
  1. 1all
    complexed with ch3, cyc
    1. chain a [15647]
2. Cyanobacterium (Mastigocladus laminosus) [TaxId: 83541] [88955] (1)
  1. 1b33
    complexed with bo4, ch3, cyc
    1. chain a [15649]
    2. chain c [15651]
    3. chain e [15653]
    4. chain h [15655]
    5. chain j [15657]
    6. chain l [15659]
3. Red algae (Porphyra yezoensis) [TaxId: 2788] [88956] (1)
  1. 1kn1
    complexed with cyc
    1. chain a [77455]
Allophycocyanin beta subunit [88957]
1. Spirulina platensis [TaxId: 118562] [88958] (1)
  1. 1all
    complexed with ch3, cyc
    1. chain b [15648]
2. Cyanobacterium (Mastigocladus laminosus) [TaxId: 83541] [88959] (1)
  1. 1b33
    complexed with bo4, ch3, cyc
    1. chain b [15650]
    2. chain d [15652]
    3. chain f [15654]
    4. chain i [15656]
    5. chain k [15658]
    6. chain m [15660]
3. Red algae (Porphyra yezoensis) [TaxId: 2788] [88960] (1)
  1. 1kn1
    complexed with cyc
    1. chain b [77456]
Phycoerythrin alpha subunit [88961]
1. Red alga (Polysiphonia urceolata) [TaxId: 65404] [88510] (1)
  1. 1lia
    complexed with cyb, cyc
    1. chain a [15661]
    2. chain k [15663]
2. Red alga (Griffithsia monilis) [TaxId: 42003] [88511] (1)
  1. 1b8d
    complexed with peb, pub
    1. chain a [15665]
    2. chain k [15667]
3. Red algae (Gracilaria chilensis) [TaxId: 2775] [88512] (1)
  1. 1eyx
    complexed with cyc, pub, so4
    1. chain a [15669]
    2. chain k [15671]
Phycoerythrin beta subunit [88513]
1. Red alga (Polysiphonia urceolata) [TaxId: 65404] [88514] (1)
  1. 1lia
    complexed with cyb, cyc
    1. chain b [15662]
    2. chain l [15664]
2. Red alga (Griffithsia monilis) [TaxId: 42003] [88515] (1)
  1. 1b8d
    complexed with peb, pub
    1. chain b [15666]
    2. chain l [15668]
3. Red algae (Gracilaria chilensis) [TaxId: 2775] [88516] (1)
  1. 1eyx
    complexed with cyc, pub, so4
    1. chain b [15670]
    2. chain l [15672]
4. Cryptophyte (Rhodomonas sp. CS24) [TaxId: 79257] [46544] (3)
  SQ P27198
  1. 1xg0
    complexed with cl, dbv, mo6, peb
    1. chain c [115275]
    2. chain d [115276]
  2. 1xf6
    complexed with cl, dbv, mo6, peb
    1. chain c [115242]
    2. chain d [115243]
  3. 1qgw
    complexed with cl, dbv, mo6, peb
    1. chain c [15673]
    2. chain d [15674]