Structural Classification of Proteins
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Family: Defensin

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Defensin-like [57391]
    Disulfide-rich fold, nearly all-beta
  4. Superfamily: Defensin-like [57392]
    link to SUPERFAMILY database - Superfamily
  5. Family: Defensin [57393]

Protein Domains:

  1. Defensin HNP-3 [57394]
    1. Human (Homo sapiens) [TaxId: 9606] [57395] (1)
      1. 1dfn picpic
        1. chain a [44570] picpiclink
        2. chain b [44571] picpiclink
  2. Beta-defensin, BD [63384]
    1. Human (Homo sapiens), HBD1 [TaxId: 9606] [64551] (4)
      1. 1ijv picpic
        complexed with br, k, so4
        1. chain a [66169] picpiclink
        2. chain b [66170] picpiclink
      2. 1iju picpic
        complexed with gol, so4
        1. chain a [66165] picpiclink
        2. chain b [66166] picpiclink
        3. chain c [66167] picpiclink
        4. chain d [66168] picpiclink
      3. 1e4s picpic
        1. chain a [59229] picpiclink
      4. 1kj5 picpic
        1. chain a [72579] picpiclink
    2. Human (Homo sapiens), HBD2 [TaxId: 9606] [63385] (4)
      1. 1fd3 picpic
        complexed with so4
        1. chain a [44572] picpiclink
        2. chain b [44573] picpiclink
        3. chain c [44574] picpiclink
        4. chain d [44575] picpiclink
      2. 1fd4 picpic
        complexed with so4
        1. chain a [44576] picpiclink
        2. chain b [44577] picpiclink
        3. chain c [44578] picpiclink
        4. chain d [44579] picpiclink
        5. chain e [44580] picpiclink
        6. chain f [44581] picpiclink
        7. chain g [44582] picpiclink
        8. chain h [44583] picpiclink
        9. chain i [44584] picpiclink
        10. chain j [44585] picpiclink
        11. chain k [44586] picpiclink
        12. chain l [44587] picpiclink
        13. chain m [44588] picpiclink
        14. chain n [44589] picpiclink
        15. chain o [44590] picpiclink
        16. chain p [44591] picpiclink
      3. 1e4q picpic
        1. chain a [59227] picpiclink
      4. 1fqq picpic
        1. chain a [59990] picpiclink
    3. Human (Homo sapiens), HBD3 [TaxId: 9606] [75672] (1)
      1. 1kj6 picpic
        1. chain a [72580] picpiclink
    4. Mouse (Mus musculus), MBD5 [TaxId: 10090] [64552] (1)
      1. 1e4t picpic
        1. chain a [59230] picpiclink
    5. Mouse (Mus musculus), MBD6 [TaxId: 10090] [64553] (1)
      1. 1e4r picpic
        1. chain a [59228] picpiclink
    6. Cow (Bos taurus), BD12 [TaxId: 9913] [63386] (1)
      1. 1bnb picpic
        1. chain a [44592] picpiclink
    7. King penguin (Aptenodytes patagonicus), spheniscin-2 [TaxId: 9234] [103570] (1)
      1. 1ut3 picpic
        1. chain a [99899] picpiclink
  3. Alpha-defensin rk-1 [64554]
    1. Rabbit (Oryctolagus cuniculus) [TaxId: 9986] [64555] (1)
      1. 1ews picpic
        1. chain a [59534] picpiclink
  4. Defensin-like peptide, DLP [57400]
    1. Duckbilled platypus (Ornithorhynchus anatinus), DLP-1 [TaxId: 9258] [57401] (1)
      1. 1b8w picpic
        1. chain a [44593] picpiclink
    2. Duckbilled platypus (Ornithorhynchus anatinus), DLP-2 [TaxId: 9258] [57402] (3)
      1. 1zue picpic
        automatically matched to d1d6ba_
        complexed with med
        1. region a:1-42 [125670] picpiclink
      2. 1zuf picpic
        automatically matched to d1d6ba_
        1. region a:1-42 [125671] picpiclink
      3. 1d6b picpic
        1. chain a [44594] picpiclink
  5. BDs-I defensin [57403]
    1. Sea anemone (Anemonia sulcata) [TaxId: 6108] [57404] (2)
      1. 2bds picpic
        1. chain a [44595] picpiclink
      2. 1bds picpic
        1. chain a [44596] picpiclink
  6. Sea anemone neurotoxin-1 [57405]
    1. Sea anemone (Stichodactyla helianthus) [TaxId: 6123] [57406] (3)
      1. 2sh1 picpic
        1. chain a [44598] picpiclink
      2. 1sh1 picpic
        1. chain a [44597] picpiclink
      3. 1shi picpic
        complexed with nh2
        1. chain a [44599] picpiclink
  7. Sea anemone toxin IA [57407]
    1. Sea anemone (Anemonia sulcata) [TaxId: 6108] [57408] (1)
      1. 1atx picpic
        1. chain a [44600] picpiclink
  8. Anthopleurin-A [57409]
    1. Giant green sea anemone (Anthopleura xanthogrammica) [TaxId: 6112] [57410] (1)
      1. 1ahl picpic
        1. chain a [44601] picpiclink
  9. Anthopleurin-B [57411]
    1. Giant green sea anemone (Anthopleura xanthogrammica) [TaxId: 6112] [57412] (1)
      1. 1apf picpic
        1. chain a [44602] picpiclink
  10. Defensin-related cryptdin 4 [118245]
    1. Mouse (Mus musculus) [TaxId: 10090] [118246] (2)
      SQ P28311 61-92
      1. 1tv0 picpic
        1. chain a [112671] picpiclink
      2. 2gw9 picpic
        automatically matched to d1tv0a_
        1. region a:1-32 [135801] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk