Structural Classification of Proteins
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Fold: FYVE/PHD zinc finger

dimetal(zinc)-bound alpha+beta fold

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: FYVE/PHD zinc finger [57902]
    dimetal(zinc)-bound alpha+beta fold

Superfamilies:

  1. FYVE/PHD zinc finger [57903] (3)
    link to SUPERFAMILY database - Superfamily
    1. FYVE, a phosphatidylinositol-3-phosphate binding domain [57904] (6)
      1. vps27p protein [57905]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [57906] (1) picpic
      2. Eea1 [64583]
        1. Human (Homo sapiens) [TaxId: 9606] [64584] (3) picpic
      3. Hrs [57907]
        protein involved in membrane trafficking and signal transduction
        1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [57908] (1) picpic
      4. Effector domain of rabphilin-3a [57909]
        contains additional N-terminal long alpha-helix
        1. Rat (Rattus norvegicus) [TaxId: 10116] [57910] (1) picpic
      5. Zinc finger FYVE domain containing protein 19 [118324]
        1. Mouse (Mus musculus) [TaxId: 10090] [118325] (1) picpic
          SQ Q9DAZ9 1-75
      6. Rififylin (FYVE-RING finger protein Sakura) [118326]
        1. Human (Homo sapiens) [TaxId: 9606] [118327] (1) picpic
          SQ Q8WZ73 45-139
    2. PHD domain [57911] (14)
      1. Williams-Beuren syndrome transcription factor, WSTF [57912]
        1. Human (Homo sapiens) [TaxId: 9606] [57913] (1) picpic
      2. Nuclear corepressor KAP-1 (TIF-1beta) [57914]
        1. Human (Homo sapiens) [TaxId: 9606] [57915] (1) picpic
      3. Mi2-beta (CHD4) [90226]
        chromodomain-helicase-DNA-binding protein 4
        1. Human (Homo sapiens) [TaxId: 9606] [90227] (2) picpic
      4. PHD finger protein At5g26210 [118328]
        1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [118329] (1) picpic
          SQ O81488 201-251
      5. PHD finger protein At1g33420 [118330]
        1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [118331] (1) picpic
          SQ Q9C810 595-653
      6. Death associated transcription factor 1, Datf1 (DIO-1) [118332]
        1. Mouse (Mus musculus) [TaxId: 10090] [118333] (1) picpic
          SQ Q8C9B9 257-319
      7. Inhibitor of growth protein 4, Ing4 [118334]
        1. Mouse (Mus musculus) [TaxId: 10090] [118335] (2) picpic
          SQ Q8C0D7 188-245
        2. Homo sapiens [TaxId: 9606] [161223] (5) picpic
      8. PHD finger protein 8 [118336]
        1. Mouse (Mus musculus) [TaxId: 10090] [118337] (1) picpic
          SQ Q80TJ7 1-66
      9. PHD finger protein 7 (NYD-SP6) [118338]
        1. Mouse (Mus musculus) [TaxId: 10090] [118339] (1) picpic
          SQ Q9DAG9 232-304
      10. PHD Inhibitor of growth protein 2, Ing2 [118340]
        1. Mouse (Mus musculus) [TaxId: 10090] [118341] (1) picpic
          SQ Q9ESK4 205-262
      11. PHD finger protein 22 [118342]
        1. Mouse (Mus musculus) [TaxId: 10090] [118343] (1) picpic
          SQ Q9D168 150-224
      12. Sumoylation ligase E3, SIZ1 [118344]
        1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [118345] (1) picpic
          SQ Q680Q4 104-168
      13. V(D)J recombination-activating protein 2, Rag2 [161224]
        1. Mouse (Mus musculus) [TaxId: 10090] [161225] (14) picpic
          SQ P21784 414-487
    3. variant PHD-like domain [118346] (1)
      1. Hypothetical protein KIAA1045 [118347]
        1. Human (Homo sapiens) [TaxId: 9606] [118348] (1) picpic
          SQ Q9UPV7 123-198
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk