Structural Classification of Proteins
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Superfamily: Snake toxin-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Snake toxin-like [57301]
    disulfide-rich fold: nearly all-beta
  4. Superfamily: Snake toxin-like [57302]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Snake venom toxins [57303] (36)
    1. Erabutoxin B (also neurotoxin B) [57304]
      1. Sea snake (Laticauda semifasciata) [TaxId: 8631] [57305] (7) picpic
    2. gamma-Cardiotoxin [57306]
      1. Snake (Naja nigricollis) [TaxId: 8654] [57307] (3) picpic
    3. Fasciculin [57308]
      different isoforms
      1. Green mamba (Dendroaspis angusticeps) [TaxId: 8618] [57309] (8) picpic
    4. Muscarinic toxin [90152]
      acetylcholine receptor binding protein
      1. Green mamba (Dendroaspis angusticeps) [TaxId: 8618] [90153] (1) picpic
    5. Erabutoxin A [57310]
      1. Broad-banded blue sea snake (Laticauda semifasciata) [TaxId: 8631] [57311] (3) picpic
    6. Neurotoxin I [57312]
      1. Snake (Naja naja oxiana) [TaxId: 8657] [57313] (2) picpic
        SQ P01382
    7. Cardiotoxin V4II (Toxin III) [57314]
      1. Naja mossambica mossambica [TaxId: 196380] [57315] (1) picpic
    8. Cardiotoxin V [57316]
      1. Taiwan cobra (Naja naja atra) [TaxId: 8656] [57317] (2) picpic
    9. alpha-Cobratoxin [57318]
      1. Cobra (Naja siamensis) [TaxId: 84476] [57319] (7) picpic
      2. Monocled cobra (Naja naja kaouthia) [TaxId: 8649] [82899] (2) picpic
        identical sequence to the Naja naja siamensis toxin
    10. Long neurotoxin 1 (component LSIII) [57320]
      1. Sea snake (Laticauda semifasciata) [TaxId: 8631] [57321] (1) picpic
    11. FS2 toxin [57322]
      1. Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620] [57323] (1) picpic
    12. Bungarotoxin [57324]
      1. Many-banded krait (Bungarus multicinctus), Alpha-bungarotoxin [TaxId: 8616] [57325] (22) picpic
      2. Many-banded krait (Bungarus multicinctus), kappa-bungarotoxin [TaxId: 8616] [57326] (1) picpic
      3. Many-banded krait (Bungarus multicinctus), neuronal bungarotoxin [TaxId: 8616] [57327] (1) picpic
      4. Many-banded krait (Bungarus multicinctus), gamma-bungarotoxin [TaxId: 8616] [111403] (1) picpic
        SQ Q9YGJ0 22-89
    13. Bucandin [57328]
      1. Malayan krait (Bungarus candidus) [TaxId: 92438] [57329] (2) picpic
    14. Cardiotoxin CTXI [57330]
      1. Taiwan cobra (Naja naja atra) [TaxId: 8656] [57331] (1) picpic
    15. Cardiotoxin CTX IIB [57332]
      1. Naja mossambica mossambica [TaxId: 196380] [57333] (1) picpic
    16. Cardiotoxin II [57334]
      1. Taiwan cobra (Naja naja atra) [TaxId: 8656] [57335] (3) picpic
      2. Central asian cobra (Naja naja oxiana) [TaxId: 8657] [57336] (3) picpic
    17. Cardiotoxin III [57337]
      1. Taiwan cobra (Naja naja atra) [TaxId: 8656] [57338] (7) picpic
        SQ P60301 22-81
    18. Cardiotoxin IV [57339]
      1. Taiwan cobra (Naja naja atra) [TaxId: 8656] [57340] (2) picpic
    19. Cobrotoxin II (ct2) [57341]
      1. Taiwan cobra (Naja naja atra) [TaxId: 8656] [57342] (3) picpic
        SQ P60770 22-83
      2. Monocled cobra (Naja kaouthia) [TaxId: 8649] [57343] (1) picpic
    20. alpha-Toxin [57344]
      1. Spitting cobra (Naja nigricollis) [TaxId: 8654] [57345] (2) picpic
      2. Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620] [57346] (1) picpic
    21. Neurotoxin II (Nt2, cobrotoxin B) [57347]
      1. Central asian cobra (Naja naja oxiana) [TaxId: 8657] [57348] (1) picpic
      2. Monocled cobra (Naja kaouthia) [TaxId: 8649] [64550] (1) picpic
      3. Chinese cobra (Naja atra) [TaxId: 8656] [103569] (2) picpic
        SQ P80958 22-82
    22. Toxin B (long neurotoxin) [57349]
      1. King cobra (Ophiophagus hannah) [TaxId: 8665] [57350] (2) picpic
    23. Candoxin [69949]
      1. Malayan krait (Bungarus candidus) [TaxId: 92438] [69950] (1) picpic
    24. Bucain [111404]
      1. Malaysian krait (Bungarus candidus) [TaxId: 92438] [111405] (3) picpic
        SQ P83346
    25. Irditoxin subunit A [144103]
      1. Brown tree snake (Boiga irregularis) [TaxId: 92519] [144104] (1) picpic
        SQ A0S864 35-109
    26. Irditoxin subunit B [144105]
      1. Brown tree snake (Boiga irregularis) [TaxId: 92519] [144106] (1) picpic
        SQ A0S865 35-111
    27. Denmotoxin [144107]
      1. Mangrove snake (Boiga dendrophila) [TaxId: 46286] [144108] (2) picpic
        SQ Q06ZW0 33-111
  2. Dendroaspin [57351] (1)
    1. Dendroaspin [57352]
      lacks neurotoxicity; acts as the disintegrins: contains RGD-motif
      1. Dendroaspis jamesoni kaimosae [TaxId: 8619] [57353] (1) picpic
  3. Extracellular domain of cell surface receptors [57354] (9)
    1. CD59 [57355]
      1. Human (Homo sapiens) [TaxId: 9606] [57356] (10) picpic
    2. Type II activin receptor [57357]
      1. Mouse (Mus musculus) [TaxId: 10090] [57358] (4) picpic
      2. Rat (Rattus norvegicus) [TaxId: 10116] [90154] (2) picpic
      3. Mouse (Mus musculus), isoform IIB [TaxId: 10090] [111406] (3) picpic
        SQ P27040 23-120; 100% sequence identity to the rat domain of the same type IIb (scop_sp 90154)
    3. BMP receptor Ia ectodomain [57359]
      1. Human (Homo sapiens) [TaxId: 9606] [57360] (6) picpic
    4. TGF-beta type II receptor extracellular domain [69951]
      elaborated with additional structures resulting in a beta-sandwich fold
      1. Human (Homo sapiens) [TaxId: 9606] [69952] (4) picpic
      2. Chicken (Gallus gallus) [TaxId: 9031] [82900] (1) picpic
    5. Urokinase plasminogen activator surface receptor uPAR [161128]
      duplication: tandem repeat of three similar domains; the N-terminal and C-terminal domains belong to Pfam 00021; uPAR/Ly6
      1. Human (Homo sapiens) [TaxId: 9606] [161129] (12) picpic
        SQ Q03405 109-209! SQ Q03405 210-299! SQ Q03405 23-108
    6. Urokinase plasminogen activator surface receptor, UPAR [161130]
      duplication; comprises three domains of this fold
      1. Human (Homo sapiens) [TaxId: 9606] [161131] (33) picpic
        SQ Q03405 111-210! SQ Q03405 114-210! SQ Q03405 211-297! SQ Q03405 211-301! SQ Q03405 23-102! SQ Q03405 23-104

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
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