Structural Classification of Proteins
Fold: Snake toxin-like
disulfide-rich fold: nearly all-beta
Lineage:
Root:
scop
Class:
Small proteins
[56992]
Usually dominated by metal ligand, heme, and/or disulfide bridges
Fold:
Snake toxin-like
[57301]
disulfide-rich fold: nearly all-beta
Superfamilies:
Snake toxin-like
[57302] (3)
uperfamily
Snake venom toxins
[57303] (36)
Erabutoxin B (also neurotoxin B) [57304]
Sea snake (Laticauda semifasciata)
[TaxId: 8631]
[57305] (7)
3ebx
complexed with so4
chain a
[44389]
1qkd
chain a
[44390]
chain b
[44391]
1qke
complexed with so4
chain a
[44392]
6ebx
complexed with scn
chain a
[44393]
chain b
[44394]
1nxb
chain a
[44395]
1era
chain a
[44397]
1fra
chain a
[44396]
gamma-Cardiotoxin [57306]
Snake (Naja nigricollis)
[TaxId: 8654]
[57307] (3)
1tgx
complexed with cl
chain a
[44398]
chain b
[44399]
chain c
[44400]
1cxn
chain a
[44401]
1cxo
chain a
[44402]
Fasciculin [57308]
different isoforms
Green mamba (Dendroaspis angusticeps)
[TaxId: 8618]
[57309] (8)
1fas
chain a
[44403]
1fsc
complexed with o s
chain a
[44404]
1ku6
complexed with edo, nag
chain b
[91038]
1f8u
complexed with nag; mutant
chain b
[44406]
1b41
complexed with fuc, nag; mutant
chain b
[44409]
1fss
complexed with nag, zn
chain b
[44408]
1mah
complexed with nag
chain f
[44407]
1qm7
engineered chimera with alpha-toxin
chain a
[44405]
Muscarinic toxin [90152]
acetylcholine receptor binding protein
Green mamba (Dendroaspis angusticeps)
[TaxId: 8618]
[90153] (1)
1ff4
complexed with sul
chain a
[83251]
Erabutoxin A [57310]
Broad-banded blue sea snake (Laticauda semifasciata)
[TaxId: 8631]
[57311] (3)
3era
complexed with scn; mutant
chain a
[44410]
chain b
[44411]
2era
mutant
chain a
[44412]
5ebx
complexed with so4
chain a
[44413]
Neurotoxin I [57312]
Snake (Naja naja oxiana)
[TaxId: 8657]
[57313] (2)
SQ
P01382
1ntn
chain a
[44414]
1w6b
chain a
[114268]
Cardiotoxin V4II (Toxin III) [57314]
Naja mossambica mossambica
[TaxId: 196380]
[57315] (1)
1cdt
complexed with po4
chain a
[44415]
chain b
[44416]
Cardiotoxin V [57316]
Taiwan cobra (Naja naja atra)
[TaxId: 8656]
[57317] (2)
1kxi
chain a
[44417]
chain b
[44418]
1cvo
chain a
[44419]
alpha-Cobratoxin [57318]
Cobra (Naja siamensis)
[TaxId: 84476]
[57319] (7)
2ctx
chain a
[44420]
1ctx
chain a
[44421]
1yi5
automatically matched to d1ctx__
region f:1-68
[123261]
1yi5
automatically matched to d1ctx__
region g:1-68
[123262]
1yi5
automatically matched to d1ctx__
region h:1-68
[123263]
1yi5
automatically matched to d1ctx__
region i:1-67
[123264]
1yi5
automatically matched to d1ctx__
region j:1-68
[123265]
Monocled cobra (Naja naja kaouthia)
[TaxId: 8649]
[82899] (2)
identical sequence to the
Naja naja siamensis
toxin
1lxg
complexed to a cognate peptide, chain B
chain a
[78294]
1lxh
complexed to a cognate peptide, chain B
chain a
[78295]
Long neurotoxin 1 (component LSIII) [57320]
Sea snake (Laticauda semifasciata)
[TaxId: 8631]
[57321] (1)
1lsi
chain a
[44422]
FS2 toxin [57322]
Black mamba (Dendroaspis polylepis polylepis)
[TaxId: 8620]
[57323] (1)
1tfs
chain a
[44423]
Bungarotoxin [57324]
Many-banded krait (Bungarus multicinctus), Alpha-bungarotoxin
[TaxId: 8616]
[57325] (22)
1hc9
complexed with high affinity peptide
complexed with ido
chain a
[65786]
chain b
[65787]
2qc1
automatically matched to d1hc9a_
complexed with man, nag; mutant
region a:1-74
[150650]
2abx
chain a
[44424]
chain b
[44425]
1kfh
chain a
[72412]
1ikc
complexed with a mimotope of the nicotinic acetylcholine receptor, chain B
chain a
[62526]
1abt
chain a
[44426]
1jbd
complexed with a mimotope of the nicotinic acetylcholine receptor, chain B
chain a
[62844]
1haj
complexed with a high affinity 13-mer peptide
chain a
[60878]
1ljz
complexed with an ACHR peptide, chain B
chain a
[73947]
1haa
complexed with a high affinity 13-mer peptide
chain a
[60877]
1idi
chain a
[62298]
1bxp
chain a
[44428]
1hoy
complexed with a mimotope of the nicotinic acetylcholine receptor, chain B
chain a
[44429]
1kc4
complex with the principal binding sequence on the alpha7 subunit of a neuronal nicotinic acetylcholine receptor, chain B
chain a
[72293]
2btx
chain a
[44430]
1idh
complexed to an 18mer cognate peptide
chain a
[62297]
1idl
chain a
[62299]
1rgj
complexed with a mimotope of the nicotinic acetylcholine receptor, chain B
chain a
[97439]
1l4w
complexed with an ACHR peptide, chain B
chain a
[73570]
1idg
complexed to an 18mer cognate peptide
chain a
[62296]
1kl8
complex with the principal binding sequence on the alpha7 subunit of a neuronal nicotinic acetylcholine receptor, chain B
chain a
[72680]
1ik8
chain a
[62525]
Many-banded krait (Bungarus multicinctus), kappa-bungarotoxin
[TaxId: 8616]
[57326] (1)
1kba
chain a
[44431]
chain b
[44432]
Many-banded krait (Bungarus multicinctus), neuronal bungarotoxin
[TaxId: 8616]
[57327] (1)
2nbt
chain a
[44433]
chain b
[44434]
Many-banded krait (Bungarus multicinctus), gamma-bungarotoxin
[TaxId: 8616]
[111403] (1)
SQ
Q9YGJ0
22-89
1mr6
chain a
[103847]
Bucandin [57328]
Malayan krait (Bungarus candidus)
[TaxId: 92438]
[57329] (2)
1f94
chain a
[44435]
1ijc
chain a
[66154]
Cardiotoxin CTXI [57330]
Taiwan cobra (Naja naja atra)
[TaxId: 8656]
[57331] (1)
2cdx
chain a
[44436]
Cardiotoxin CTX IIB [57332]
Naja mossambica mossambica
[TaxId: 196380]
[57333] (1)
2ccx
chain a
[44437]
Cardiotoxin II [57334]
Taiwan cobra (Naja naja atra)
[TaxId: 8656]
[57335] (3)
1chv
chain s
[44438]
1crf
chain a
[44439]
1cre
chain a
[44440]
Central asian cobra (Naja naja oxiana)
[TaxId: 8657]
[57336] (3)
1cb9
chain a
[44442]
1ccq
chain a
[44443]
1ffj
solution structure in dpc-micelle
chain a
[44441]
Cardiotoxin III [57337]
Taiwan cobra (Naja naja atra)
[TaxId: 8656]
[57338] (7)
SQ
P60301
22-81
1h0j
complexed with sds
chain a
[83432]
chain b
[83433]
chain c
[83434]
2bhi
automatically matched to d1h0ja_
complexed with c10, sft
region a:1-60
[128531]
2bhi
automatically matched to d1h0ja_
complexed with c10, sft
region b:1-60
[128532]
1xt3
complexed with cit, idu, sgn
chain a
[116010]
chain b
[116011]
1i02
chain a
[44444]
2crs
chain a
[44445]
2crt
chain a
[44446]
Cardiotoxin IV [57339]
Taiwan cobra (Naja naja atra)
[TaxId: 8656]
[57340] (2)
1kbs
chain a
[44447]
1kbt
chain a
[44448]
Cobrotoxin II (ct2) [57341]
Taiwan cobra (Naja naja atra)
[TaxId: 8656]
[57342] (3)
SQ
P60770
22-83
1v6p
complexed with cl, cu, eoh, na
chain a
[113548]
chain b
[113549]
1coe
chain a
[44450]
1cod
chain a
[44449]
Monocled cobra (Naja kaouthia)
[TaxId: 8649]
[57343] (1)
1g6m
chain a
[44451]
alpha-Toxin [57344]
Spitting cobra (Naja nigricollis)
[TaxId: 8654]
[57345] (2)
1iq9
complexed with so4
chain a
[90669]
1nea
chain a
[44452]
Black mamba (Dendroaspis polylepis polylepis)
[TaxId: 8620]
[57346] (1)
1ntx
chain a
[44453]
Neurotoxin II (Nt2, cobrotoxin B) [57347]
Central asian cobra (Naja naja oxiana)
[TaxId: 8657]
[57348] (1)
1nor
chain a
[44454]
Monocled cobra (Naja kaouthia)
[TaxId: 8649]
[64550] (1)
1je9
chain a
[62911]
Chinese cobra (Naja atra)
[TaxId: 8656]
[103569] (2)
SQ
P80958
22-82
1vb0
complexed with so4, trs
chain a
[113601]
1onj
complexed with so4
chain a
[93358]
Toxin B (long neurotoxin) [57349]
King cobra (Ophiophagus hannah)
[TaxId: 8665]
[57350] (2)
1txb
chain a
[44455]
1txa
chain a
[44456]
Candoxin [69949]
Malayan krait (Bungarus candidus)
[TaxId: 92438]
[69950] (1)
1jgk
chain a
[66678]
Bucain [111404]
Malaysian krait (Bungarus candidus)
[TaxId: 92438]
[111405] (3)
SQ
P83346
2h8u
automatically matched to d1vyca_
region a:1-65
[136246]
2h8u
automatically matched to d1vyca_
region b:1-65
[136247]
1vyc
chain a
[108899]
Irditoxin subunit A [144103]
Brown tree snake (Boiga irregularis)
[TaxId: 92519]
[144104] (1)
SQ
A0S864
35-109
2h7z
region a:1-75
[136231]
Irditoxin subunit B [144105]
Brown tree snake (Boiga irregularis)
[TaxId: 92519]
[144106] (1)
SQ
A0S865
35-111
2h7z
region b:1-77
[136232]
Denmotoxin [144107]
Mangrove snake (Boiga dendrophila)
[TaxId: 46286]
[144108] (2)
SQ
Q06ZW0
33-111
2h5f
complexed with k, na, po4
region a:3-77
[136147]
2h5f
automatically matched to 2H5F A:3-77
complexed with k, na, po4
region b:4-77
[136148]
Dendroaspin
[57351] (1)
Dendroaspin [57352]
lacks neurotoxicity; acts as the disintegrins: contains RGD-motif
Dendroaspis jamesoni kaimosae
[TaxId: 8619]
[57353] (1)
1drs
chain a
[44457]
Extracellular domain of cell surface receptors
[57354] (9)
CD59 [57355]
Human (Homo sapiens)
[TaxId: 9606]
[57356] (10)
2j8b
automatically matched to d1cdqa_
region a:1-77
[147908]
2uwr
automatically matched to d1cdqa_
region a:1-77
[152220]
2ux2
automatically matched to d1cdqa_
region a:1-77
[152249]
2ux2
automatically matched to d1cdqa_
region b:1-77
[152250]
2ux2
automatically matched to d1cdqa_
region c:1-77
[152251]
1erh
CA-atoms only
chain a
[44458]
1cds
complexed with nag
chain a
[44461]
1cdq
chain a
[44459]
1cdr
complexed with fuc, nag
chain a
[44460]
1erg
chain a
[44462]
Type II activin receptor [57357]
Mouse (Mus musculus)
[TaxId: 10090]
[57358] (4)
1bte
complexed with nag
chain a
[44463]
chain b
[44464]
2goo
automatically matched to d1btea_
complexed with ndg
region c:8-99
[135443]
2goo
automatically matched to d1btea_
complexed with ndg
region f:8-99
[135446]
1lx5
complexed with BMP7
complexed with man, nag
chain b
[84733]
Rat (Rattus norvegicus)
[TaxId: 10116]
[90154] (2)
1nys
complexed with activin A
chain a
[86413]
chain c
[86415]
1nyu
complexed with activin A
chain a
[86425]
chain c
[86427]
Mouse (Mus musculus), isoform IIB
[TaxId: 10090]
[111406] (3)
SQ
P27040
23-120; 100% sequence identity to the rat domain of the same type IIb (
scop_sp 90154
)
2h62
automatically matched to d1s4yc_
region d:8-98
[136180]
2h64
automatically matched to d1s4yc_
mutant
region c:8-99
[136182]
1s4y
Structural genomics target
chain a
[105256]
chain c
[105258]
BMP receptor Ia ectodomain [57359]
Human (Homo sapiens)
[TaxId: 9606]
[57360] (6)
2h62
automatically matched to d1es7d_
region c:34-117
[136179]
2h64
automatically matched to d1es7d_
mutant
region b:34-118
[136181]
1rew
chain c
[97336]
chain d
[97337]
2goo
automatically matched to d1es7d_
complexed with ndg
region b:34-118
[135442]
2goo
automatically matched to d1es7d_
complexed with ndg
region e:34-118
[135445]
1es7
chain b
[44465]
chain d
[44466]
TGF-beta type II receptor extracellular domain [69951]
elaborated with additional structures resulting in a beta-sandwich fold
Human (Homo sapiens)
[TaxId: 9606]
[69952] (4)
1m9z
complexed with cry; mutant
chain a
[78881]
1ktz
complex with tgf-beta3
chain b
[68868]
2pjy
automatically matched to d1ploa_
mutant
region b:19-126
[149584]
1plo
mutant
chain a
[94886]
Chicken (Gallus gallus)
[TaxId: 9031]
[82900] (1)
1ks6
chain a
[77517]
Urokinase plasminogen activator surface receptor uPAR [161128]
duplication: tandem repeat of three similar domains; the N-terminal and C-terminal domains belong to
Pfam 00021
; uPAR/Ly6
Human (Homo sapiens)
[TaxId: 9606]
[161129] (12)
SQ
Q03405
109-209! SQ
Q03405
210-299! SQ
Q03405
23-108
2i9b
complexed with bma, nag, so4; mutant
region e:188-277
[145508]
2i9b
complexed with bma, nag, so4; mutant
region e:1-86
[145509]
2i9b
complexed with bma, nag, so4; mutant
region e:87-187
[145510]
2i9b
automatically matched to 2I9B E:188-277
complexed with bma, nag, so4; mutant
region f:188-277
[145511]
2i9b
automatically matched to 2I9B E:1-86
complexed with bma, nag, so4; mutant
region f:1-86
[145512]
2i9b
automatically matched to 2I9B E:87-187
complexed with bma, nag, so4; mutant
region f:87-187
[145513]
2i9b
automatically matched to 2I9B E:188-277
complexed with bma, nag, so4; mutant
region g:188-277
[145514]
2i9b
automatically matched to 2I9B E:1-86
complexed with bma, nag, so4; mutant
region g:1-82
[145515]
2i9b
automatically matched to 2I9B E:87-187
complexed with bma, nag, so4; mutant
region g:94-187
[145516]
2i9b
automatically matched to 2I9B E:188-277
complexed with bma, nag, so4; mutant
region h:188-277
[145517]
2i9b
automatically matched to 2I9B E:1-86
complexed with bma, nag, so4; mutant
region h:1-82
[145518]
2i9b
automatically matched to 2I9B E:87-187
complexed with bma, nag, so4; mutant
region h:94-187
[145519]
Urokinase plasminogen activator surface receptor, UPAR [161130]
duplication; comprises three domains of this fold
Human (Homo sapiens)
[TaxId: 9606]
[161131] (33)
SQ
Q03405
111-210! SQ
Q03405
114-210! SQ
Q03405
211-297! SQ
Q03405
211-301! SQ
Q03405
23-102! SQ
Q03405
23-104
2fd6
complexed with edo, etx, fuc, nag, pg4, pge, so4
region u:1-80
[145159]
2fd6
complexed with edo, etx, fuc, nag, pg4, pge, so4
region u:189-275
[145160]
2fd6
complexed with edo, etx, fuc, nag, pg4, pge, so4
region u:92-188
[145161]
3bt2
automatically matched to 2FD6 U:1-80
complexed with nag
region u:1-80
[155547]
3bt2
automatically matched to 2FD6 U:189-275
complexed with nag
region u:189-275
[155548]
3bt2
automatically matched to 2FD6 U:92-188
complexed with nag
region u:92-188
[155549]
1ywh
complexed with alc, bma, fuc, man, nag, ndg, so4
region a:89-188
[145925]
1ywh
complexed with alc, bma, fuc, man, nag, ndg, so4
region a:1-82
[145926]
1ywh
complexed with alc, bma, fuc, man, nag, ndg, so4
region a:189-279
[145927]
1ywh
automatically matched to 1YWH A:89-188
complexed with alc, bma, fuc, man, nag, ndg, so4
region c:91-188
[145928]
1ywh
automatically matched to 1YWH A:1-82
complexed with alc, bma, fuc, man, nag, ndg, so4
region c:1-80
[145929]
1ywh
automatically matched to 1YWH A:189-279
complexed with alc, bma, fuc, man, nag, ndg, so4
region c:189-275
[145930]
1ywh
automatically matched to 1YWH A:89-188
complexed with alc, bma, fuc, man, nag, ndg, so4
region e:89-188
[145931]
1ywh
automatically matched to 1YWH A:1-82
complexed with alc, bma, fuc, man, nag, ndg, so4
region e:1-79
[145932]
1ywh
automatically matched to 1YWH A:189-279
complexed with alc, bma, fuc, man, nag, ndg, so4
region e:189-278
[145933]
1ywh
automatically matched to 1YWH A:89-188
complexed with alc, bma, fuc, man, nag, ndg, so4
region g:92-188
[145934]
1ywh
automatically matched to 1YWH A:1-82
complexed with alc, bma, fuc, man, nag, ndg, so4
region g:1-79
[145935]
1ywh
automatically matched to 1YWH A:189-279
complexed with alc, bma, fuc, man, nag, ndg, so4
region g:189-276
[145936]
1ywh
automatically matched to 1YWH A:89-188
complexed with alc, bma, fuc, man, nag, ndg, so4
region i:92-188
[145937]
1ywh
automatically matched to 1YWH A:1-82
complexed with alc, bma, fuc, man, nag, ndg, so4
region i:1-82
[145938]
1ywh
automatically matched to 1YWH A:189-279
complexed with alc, bma, fuc, man, nag, ndg, so4
region i:189-275
[145939]
1ywh
automatically matched to 1YWH A:89-188
complexed with alc, bma, fuc, man, nag, ndg, so4
region k:90-188
[145940]
1ywh
automatically matched to 1YWH A:1-82
complexed with alc, bma, fuc, man, nag, ndg, so4
region k:1-78
[145941]
1ywh
automatically matched to 1YWH A:189-279
complexed with alc, bma, fuc, man, nag, ndg, so4
region k:189-276
[145942]
1ywh
automatically matched to 1YWH A:89-188
complexed with alc, bma, fuc, man, nag, ndg, so4
region m:89-188
[145943]
1ywh
automatically matched to 1YWH A:1-82
complexed with alc, bma, fuc, man, nag, ndg, so4
region m:1-81
[145944]
1ywh
automatically matched to 1YWH A:189-279
complexed with alc, bma, fuc, man, nag, ndg, so4
region m:189-277
[145945]
1ywh
automatically matched to 1YWH A:89-188
complexed with alc, bma, fuc, man, nag, ndg, so4
region o:92-188
[145946]
1ywh
automatically matched to 1YWH A:1-82
complexed with alc, bma, fuc, man, nag, ndg, so4
region o:1-81
[145947]
1ywh
automatically matched to 1YWH A:189-279
complexed with alc, bma, fuc, man, nag, ndg, so4
region o:189-276
[145948]
3bt1
automatically matched to 2FD6 U:1-80
complexed with man, nag
region u:1-80
[155537]
3bt1
automatically matched to 2FD6 U:189-275
complexed with man, nag
region u:189-275
[155538]
3bt1
automatically matched to 2FD6 U:92-188
complexed with man, nag
region u:92-188
[155539]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk