Structural Classification of Proteins
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Family: SepSecS-like

Pfam 05889

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: PLP-dependent transferase-like [53382]
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. Superfamily: PLP-dependent transferases [53383]
    link to SUPERFAMILY database - Superfamily
  5. Family: SepSecS-like [159704]
    Pfam 05889

Protein Domains:

  1. Selenocysteinyl-tRNA synthase (SepSecS) [159705]
    1. Mouse (Mus musculus) [TaxId: 10090] [159706] (3)
      SQ Q6P6M7 23-467
      1. 3bc8 picpic
        complexed with cl, edo
        1. region a:23-467 [155124] picpiclink
      2. 3bcb picpic
        automatically matched to 3BC8 A:23-467
        complexed with cl, po4
        1. region a:23-467 [155126] picpiclink
      3. 3bca picpic
        automatically matched to 3BC8 A:23-467
        complexed with iod
        1. region a:23-466 [155125] picpiclink
    2. Archaeoglobus fulgidus [TaxId: 2234] [159707] (4)
      SQ O30207 8-371
      1. 2e7j picpic
        automatically matched to 2E7I A:8-371
        complexed with plp, so4
        1. region a:8-371 [146704] picpiclink
      2. 2e7j picpic
        automatically matched to 2E7I A:8-371
        complexed with plp, so4
        1. region b:8-371 [146705] picpiclink
      3. 2e7i picpic
        complexed with plp, so4
        1. region a:8-371 [146702] picpiclink
      4. 2e7i picpic
        automatically matched to 2E7I A:8-371
        complexed with plp, so4
        1. region b:8-371 [146703] picpiclink
    3. Methanococcus maripaludis [TaxId: 39152] [159708] (4)
      SQ Q6LZM9 1-434
      1. 2z67 picpic
        complexed with plp, so4
        1. region a:1-434 [154170] picpiclink
      2. 2z67 picpic
        automatically matched to 2Z67 A:1-434
        complexed with plp, so4
        1. region b:1-434 [154171] picpiclink
      3. 2z67 picpic
        automatically matched to 2Z67 A:1-434
        complexed with plp, so4
        1. region c:1-434 [154172] picpiclink
      4. 2z67 picpic
        automatically matched to 2Z67 A:1-434
        complexed with plp, so4
        1. region d:1-434 [154173] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk