Structural Classification of Proteins
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Fold: MurD-like peptide ligases, peptide-binding domain

3 layers: a/b/a; mixed beta-sheet of 6 strands, order 126345; strand 1 is antiparallel to the rest

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: MurD-like peptide ligases, peptide-binding domain [53243]
    3 layers: a/b/a; mixed beta-sheet of 6 strands, order 126345; strand 1 is antiparallel to the rest

Superfamilies:

  1. MurD-like peptide ligases, peptide-binding domain [53244] (2)
    link to SUPERFAMILY database - Superfamily
    1. MurCDEF C-terminal domain [53245] (5)
      1. UDP-N-acetylmuramate-alanine ligase MurC [82452]
        1. Thermotoga maritima [TaxId: 2336] [82453] (1) picpic
          TM0231
        2. Haemophilus influenzae [TaxId: 727] [89727] (4) picpic
      2. UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD [53246]
        1. Escherichia coli [TaxId: 562] [53247] (11) picpic
      3. UDP-N-acetylmuramyl tripeptide synthetase MurE [64107]
        1. Escherichia coli [TaxId: 562] [64108] (1) picpic
      4. UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF [53248]
        1. Escherichia coli [TaxId: 562] [53249] (1) picpic
    2. Folylpolyglutamate synthetase, C-terminal domain [53250] (2)
      1. Folylpolyglutamate synthetase, C-terminal domain [53251]
        1. Lactobacillus casei [TaxId: 1582] [53252] (7) picpic
        2. Thermotoga maritima [TaxId: 2336] [102532] (1) picpic
          TM0166
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk