Structural Classification of Proteins
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Family: ROK

Pfam 00480

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Ribonuclease H-like motif [53066]
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. Superfamily: Actin-like ATPase domain [53067]
    duplication contains two domains of this fold
    link to SUPERFAMILY database - Superfamily
  5. Family: ROK [110636]
    Pfam 00480

Protein Domains:

  1. Inorganic polyphosphate/ATP-glucomannokinase PPGMK [110637]
    1. Arthrobacter sp. KM [TaxId: 184230] [110638] (1)
      SQ Q7WT42 11-263 # Fragment
      1. 1woq picpic
        complexed with glc, ips
        1. region a:11-139 [109462] picpiclink
        2. region a:140-263 [109463] picpiclink
        3. region b:11-139 [109464] picpiclink
        4. region b:140-263 [109465] picpiclink
  2. Putative fructokinase YhdR [117642]
    1. Bacillus subtilis [TaxId: 1423] [117643] (1)
      SQ O05510
      1. 1xc3 picpic
        Structural genomics target
        complexed with gol, pt, zn
        1. region a:1-118 [115102] picpiclink
        2. region a:119-294 [115103] picpiclink
  3. N-acetylglucosamine kinase [142469]
    Transcriptional regulator, XylR-related
    1. Thermotoga maritima [TaxId: 2336] [142470] (2)
      SQ Q9X0V1 200-368! SQ Q9X0V1 72-199
      TM1224
      1. 2hoe picpicxref
        complexed with gol, k
        1. region a:200-368 [136640] picpiclink
      2. 2hoe picpicxref
        complexed with gol, k
        1. region a:72-199 [136641] picpiclink
  4. N-acetylmannosamine kinase NanK [142471]
    1. Escherichia coli [TaxId: 562] [142472] (4)
      SQ P45425 1-119! SQ P45425 120-289
      1. 2aa4 picpic
        complexed with zn
        1. region a:1-119 [126465] picpiclink
      2. 2aa4 picpic
        complexed with zn
        1. region a:120-289 [126466] picpiclink
      3. 2aa4 picpic
        automatically matched to 2AA4 A:1-119
        complexed with zn
        1. region b:1-119 [126467] picpiclink
      4. 2aa4 picpic
        automatically matched to 2AA4 A:120-289
        complexed with zn
        1. region b:120-289 [126468] picpiclink
  5. Mlc protein [142473]
    Making large colonies protein
    1. Escherichia coli [TaxId: 562] [142474] (12)
      SQ P50456 211-406! SQ P50456 82-210
      1. 1z6r picpicxrefxrefxrefxref
        complexed with zn; mutant
        1. region a:82-210 [124558] picpiclink
      2. 1z6r picpicxrefxrefxrefxref
        complexed with zn; mutant
        1. region a:211-406 [124559] picpiclink
      3. 1z6r picpicxrefxrefxrefxref
        automatically matched to 1Z6R A:82-210
        complexed with zn; mutant
        1. region b:82-210 [124561] picpiclink
      4. 1z6r picpicxrefxrefxrefxref
        automatically matched to 1Z6R A:211-406
        complexed with zn; mutant
        1. region b:211-406 [124562] picpiclink
      5. 1z6r picpicxrefxrefxrefxref
        automatically matched to 1Z6R A:82-210
        complexed with zn; mutant
        1. region c:82-210 [124564] picpiclink
      6. 1z6r picpicxrefxrefxrefxref
        automatically matched to 1Z6R A:211-406
        complexed with zn; mutant
        1. region c:211-406 [124565] picpiclink
      7. 1z6r picpicxrefxrefxrefxref
        automatically matched to 1Z6R A:82-210
        complexed with zn; mutant
        1. region d:82-210 [124567] picpiclink
      8. 1z6r picpicxrefxrefxrefxref
        automatically matched to 1Z6R A:211-406
        complexed with zn; mutant
        1. region d:211-406 [124568] picpiclink
      9. 3bp8 picpicxrefxrefxrefxref
        automatically matched to d1z6ra2
        complexed with act, zn
        1. region a:82-210 [155464] picpiclink
      10. 3bp8 picpicxrefxrefxrefxref
        automatically matched to d1z6ra3
        complexed with act, zn
        1. region a:211-406 [155465] picpiclink
      11. 3bp8 picpicxrefxrefxrefxref
        automatically matched to d1z6ra2
        complexed with act, zn
        1. region b:82-210 [155467] picpiclink
      12. 3bp8 picpicxrefxrefxrefxref
        automatically matched to d1z6ra3
        complexed with act, zn
        1. region b:211-406 [155468] picpiclink
  6. Putative regulator protein YcfX [142475]
    1. Salmonella typhimurium [TaxId: 90371] [142476] (2)
      SQ Q8ZPZ9 1-117! SQ Q8ZPZ9 118-303
      1. 2ap1 picpic
        complexed with na, zn
        1. region a:118-303 [127108] picpiclink
      2. 2ap1 picpic
        complexed with na, zn
        1. region a:1-117 [127109] picpiclink
  7. Hypothetical protein SP2142 [142477]
    1. Streptococcus pneumoniae [TaxId: 1313] [142478] (2)
      SQ Q97NB0 1-114! SQ Q97NB0 115-289
      1. 2gup picpic
        complexed with suc, trs
        1. region a:1-114 [135744] picpiclink
      2. 2gup picpic
        complexed with suc, trs
        1. region a:115-289 [135745] picpiclink
  8. Transcriptional regulator VC2007 [142479]
    1. Vibrio cholerae [TaxId: 666] [142480] (2)
      SQ Q9KQJ1 209-405! SQ Q9KQJ1 81-208
      1. 1z05 picpicxref
        complexed with bme, gol, so4, zn
        1. region a:209-405 [124299] picpiclink
      2. 1z05 picpicxref
        complexed with bme, gol, so4, zn
        1. region a:81-208 [124300] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk