Fold: Anticodon-binding domain-like

3 layers: a/b/a; mixed beta-sheet of five strands, order 21345; strand 4 is antiparallel to the rest

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: Anticodon-binding domain-like [52953]
   3 layers: a/b/a; mixed beta-sheet of five strands, order 21345; strand 4 is antiparallel to the rest

Superfamilies:

1. Class II aaRS ABD-related [52954] (2)
   uperfamily
   1. Anticodon-binding domain of Class II aaRS [52955] (13)
   2. Brix domain [142420] (2)
      Pfam 04427; tandem repeat of two ABD-like structural repeats, which are associated together with the formation of single beta-sheet, folded into half-barrel
2. TolB, N-terminal domain [52964] (1)
   uperfamily
   1. TolB, N-terminal domain [52965] (1)
3. B12-dependent dehydatase associated subunit [52968] (2)
   uperfamily
   1. Diol dehydratase, beta subunit [52969] (2)
      contains additional structures in the C-terminal extension
   2. Dehydratase-reactivating factor beta subunit [82433] (2)
4. ITPase-like [52972] (3)
   formerly Maf/Ham1; elaborated with additional structures inserted in the common fold
   uperfamily
   1. ITPase (Ham1) [52973] (5)
      Pfam 01725
   2. Maf-like [52976] (2)
   3. YjjX-like [110621] (3)
      Pfam 01931
5. CinA-like [142433] (1)
   uperfamily
   1. CinA-like [142434] (1)
      Pfam 02464
6. XCC0632-like [159594] (2)
   short crossover loop between strands 2 and 3; the antiparallel part of the beta-sheet (strands 3, 4 and 5) and the C-terminal helix are quite long
   1. NLBH-like [159595] (1)
      Pfam 05211; Neuraminyllactose-binding hemagglutinin
   2. XCC0632-like [159598] (1)
      Pfam 03886; DUF330

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk