Fold: PFL-like glycyl radical enzymes

contains: barrel, closed; n=10, S=10; accommodates a hairpin loop inside the barrel

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: PFL-like glycyl radical enzymes [51997]
   contains: barrel, closed; n=10, S=10; accommodates a hairpin loop inside the barrel

Superfamilies:

1. PFL-like glycyl radical enzymes [51998] (5)
   duplication: the N- and C-terminal halves have similar topologies
   uperfamily
   1. PFL-like [51999] (2)
      Pfam 02901; except the C-terminal ~100 residues covered by Pfam 01228
      1. Pyruvate formate-lyase, PFL [52000]
         1. Escherichia coli [TaxId: 562] [52001] (8)
      2. Glycerol dehydratase DhaB1 [110445]
         1. Clostridium butyricum [TaxId: 1492] [110446] (3)
            SQ Q8GEZ8
   2. R1 subunit of ribonucleotide reductase, C-terminal domain [52002] (2)
      1. R1 subunit of ribonucleotide reductase, C-terminal domain [52003]
         1. Escherichia coli [TaxId: 562] [52004] (8)
         2. Salmonella typhimurium [TaxId: 90371] [110447] (6)
            SQ Q08698
   3. B12-dependent (class II) ribonucleotide reductase [75131] (1)
      1. B12-dependent (class II) ribonucleotide reductase [75132]
         1. Lactobacillus leichmannii [TaxId: 28039] [75133] (1)
   4. Class III anaerobic ribonucleotide reductase NRDD subunit [52005] (1)
      1. Class III anaerobic ribonucleotide reductase NRDD subunit [52006]
         1. Bacteriophage T4 [TaxId: 10665] [52007] (5)
   5. SP0239-like [159444] (1)
      Pfam 05167; DUF771
      1. Uncharacterized protein SP0239 [159445]
         1. Streptococcus pneumoniae [TaxId: 1313] [159446] (2)
            SQ Q97ST4 1-440

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk