Structural Classification of Proteins
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Superfamily: MCP/YpsA-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: MCP/YpsA-like [102404]
    3 layers: a/b/a, parallel beta-sheet of 7 strands, order 4321567
  4. Superfamily: MCP/YpsA-like [102405]
    link to SUPERFAMILY database - Superfamily

Families:

  1. MoCo carrier protein-like [102406] (6)
    Pfam 03641
    1. Hypothetical protein TM1055 [102407]
      1. Thermotoga maritima [TaxId: 2336] [102408] (1)
        structural genomics; NESG target VT76
        1. 1rcu picpic
          1. chain a [97295] picpiclink
          2. chain b [97296] picpiclink
          3. chain c [97297] picpiclink
          4. chain d [97298] picpiclink
    2. Hypothetical protein YvdD [102409]
      1. Bacillus subtilis [TaxId: 1423] [102410] (1)
        1. 1t35 picpic
          structural genomics; NYSGRC target T833
          complexed with so4
          1. chain a [99108] picpiclink
          2. chain b [99109] picpiclink
          3. chain c [99110] picpiclink
          4. chain d [99111] picpiclink
          5. chain e [99112] picpiclink
          6. chain f [99113] picpiclink
          7. chain g [99114] picpiclink
          8. chain h [99115] picpiclink
    3. Hypothetical protein TT1887 (TTHA0294) [117563]
      1. Thermus thermophilus [TaxId: 274] [117564] (1)
        SQ Q5SLJ9
        1. 1weh picpic
          Structural genomics target
          1. chain a [114551] picpiclink
          2. chain b [114552] picpiclink
    4. Hypothetical protein TT1465 (TTHA1644) [117565]
      1. Thermus thermophilus [TaxId: 274] [117566] (1)
        SQ Q5SHT6
        1. 1wek picpic
          Structural genomics target
          complexed with po4
          1. chain a [114553] picpiclink
          2. chain b [114554] picpiclink
          3. chain c [114555] picpiclink
          4. chain d [114556] picpiclink
          5. chain e [114557] picpiclink
          6. chain f [114558] picpiclink
    5. Hypothetical protein At5g11950 [117567]
      1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [117568] (3)
        SQ Q84MC2
        1. 1ydh picpic
          Structural genomics target
          complexed with edo, no3
          1. chain a [116622] picpiclink
          2. chain b [116623] picpiclink
        2. 2q4d picpic
          automatically matched to d1ydha_
          complexed with edo, no3
          1. region a:5-188 [139845] picpiclink
        3. 2q4d picpic
          automatically matched to d1ydha_
          complexed with edo, no3
          1. region b:8-188 [139846] picpiclink
    6. Hypothetical protein At2g37210/T2N18.3 [142344]
      1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [142345] (4)
        SQ Q8L8B8 8-190
        1. 2q4o picpic
          automatically matched to 2A33 A:8-190
          complexed with mg, so4
          1. region a:8-190 [139872] picpiclink
        2. 2q4o picpic
          automatically matched to 2A33 A:8-190
          complexed with mg, so4
          1. region b:10-190 [139873] picpiclink
        3. 2a33 picpic
          complexed with mg, so4
          1. region a:8-190 [126070] picpiclink
        4. 2a33 picpic
          automatically matched to 2A33 A:8-190
          complexed with mg, so4
          1. region b:10-190 [126071] picpiclink
  2. YpsA-like [159579] (1)
    Pfam 06908; DUF1273; lacking the last strand 7; different set of conserved residues in the putative active site than in the MoCo carrier protein-like family
    1. Hypothetical protein YpsA [159580]
      1. Bacillus subtilis [TaxId: 1423] [159581] (1)
        SQ P50838 1-177
        1. 2nx2 picpic
          1. region a:1-177 [148498] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk