Structural Classification of Proteins
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Family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: FAD/NAD(P)-binding domain [51904]
    core: 3 layers, b/b/a; central parallel beta-sheet of 5 strands, order 32145; top antiparallel beta-sheet of 3 strands, meander
  4. Superfamily: FAD/NAD(P)-binding domain [51905]
    link to SUPERFAMILY database - Superfamily
  5. Family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain [51934]

Protein Domains:

  1. L-aspartate oxidase [51935]
    1. Escherichia coli [TaxId: 562] [51936] (3)
      1. 1chu picpicxrefxref
        1. region a:2-237,a:354-422 [30424] picpiclink
      2. 1knr picpicxrefxref
        complexed with cl, fad, na; mutant
        1. region a:5-237,a:354-422 [72789] picpiclink
      3. 1knp picpicxrefxref
        complexed with fad, na, sin; mutant
        1. region a:5-237,a:354-422 [72784] picpiclink
  2. Succinate dehydogenase [82311]
    1. Escherichia coli [TaxId: 562] [82312] (2)
      1. 1nek picpicxrefxrefxrefxrefxrefxref
        complexed with ca, cdn, eph, f3s, fad, fes, fs4, hem, oaa, uq2
        1. region a:1-235,a:356-450 [80427] picpiclink
      2. 1nen picpicxrefxrefxrefxrefxrefxref
        complexed with ca, cdn, dnt, eph, f3s, fad, fes, fs4, hem, oaa
        1. region a:1-235,a:356-450 [80434] picpiclink
  3. Fumarate reductase [51937]
    1. Escherichia coli [TaxId: 562] [51938] (7)
      1. 1kf6 picpicxrefxrefxrefxrefxrefxref
        complexed with 1pe, act, ce1, f3s, fad, fes, fs4, hqo, k, oaa
        1. region a:0-225,a:358-442 [72395] picpiclink
        2. region m:0-225,m:358-442 [72402] picpiclink
      2. 1l0v picpicxrefxrefxrefxrefxrefxref
        complexed with ce1, f3s, fad, fes, fs4, mq7, oaa
        1. region a:0-225,a:358-442 [73413] picpiclink
        2. region m:0-225,m:358-442 [73420] picpiclink
      3. 1kfy picpicxrefxrefxrefxrefxrefxref
        complexed with brs, ce1, f3s, fad, fes, fs4, oaa
        1. region a:0-225,a:358-442 [72428] picpiclink
        2. region m:0-225,m:358-442 [72435] picpiclink
      4. 3cir picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kf6a2
        complexed with f3s, fad, fes, sf4; mutant
        1. region a:0-225,a:358-442 [156680] picpiclink
      5. 3cir picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kf6a2
        complexed with f3s, fad, fes, sf4; mutant
        1. region m:0-225,m:358-442 [156687] picpiclink
      6. 2b76 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kf6a2
        complexed with f3s, fad, fes, flc, mq7, sf4; mutant
        1. region a:0-225,a:358-442 [128010] picpiclink
      7. 2b76 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kf6a2
        complexed with f3s, fad, fes, flc, mq7, sf4; mutant
        1. region m:0-225,m:358-442 [128017] picpiclink
    2. Wolinella succinogenes [TaxId: 844] [51939] (8)
      1. 2bs2 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pa2
        complexed with f3s, fad, fes, fmr, hem, lmt, na, sf4
        1. region a:1-250,a:372-457 [129031] picpiclink
      2. 2bs2 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pa2
        complexed with f3s, fad, fes, fmr, hem, lmt, na, sf4
        1. region d:1-250,d:372-457 [129037] picpiclink
      3. 2bs3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pa2
        complexed with cit, f3s, fad, fes, hem, lmt, na, sf4
        1. region a:1-250,a:372-457 [129043] picpiclink
      4. 2bs3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pa2
        complexed with cit, f3s, fad, fes, hem, lmt, na, sf4
        1. region d:1-250,d:372-457 [129048] picpiclink
      5. 1qlb picpicxrefxrefxrefxrefxref
        1. region a:1-250,a:372-457 [30429] picpiclink
        2. region d:1-250,d:372-457 [30430] picpiclink
      6. 2bs4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pa2
        complexed with cit, dmw, f3s, fad, fes, hem, lmt, na, sf4
        1. region a:1-250,a:372-457 [129053] picpiclink
      7. 2bs4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pa2
        complexed with cit, dmw, f3s, fad, fes, hem, lmt, na, sf4
        1. region d:1-250,d:372-457 [129058] picpiclink
      8. 1e7p picpicxrefxrefxrefxrefxref
        complexed with f3s, fad, fes, fs4, hem, lmt, mla, na; mutant
        1. region a:1-250,a:372-457 [59348] picpiclink
        2. region d:1-250,d:372-457 [59354] picpiclink
        3. region g:1-250,g:372-457 [59360] picpiclink
        4. region j:1-250,j:372-457 [59366] picpiclink
  4. Flavocytochrome c3 (respiratory fumarate reductase) [51940]
    contains additional N-terminal multiheme domain
    1. Shewanella frigidimarina [TaxId: 56812] [51941] (16)
      1. 1y0p picpicxrefxref
        automatically matched to d1qo8a2
        complexed with fad, hem, mez, na
        1. region a:111-361,a:512-568 [122508] picpiclink
      2. 1q9i picpicxrefxref
        complexed with fad, hem, na, teo; mutant
        1. region a:103-359,a:506-568 [96274] picpiclink
      3. 2b7r picpicxrefxref
        automatically matched to d1qo8a2
        complexed with fad, fum, hem, na; mutant
        1. region a:111-361,a:512-568 [128050] picpiclink
      4. 1kss picpicxrefxref
        complexed with fad, fum, hem, na; mutant
        1. region a:103-359,a:506-568 [72929] picpiclink
      5. 1m64 picpicxrefxref
        complexed with fad, fum, hem, na; mutant
        1. region a:103-359,a:506-568 [78684] picpiclink
        2. region b:103-359,b:506-568 [78687] picpiclink
      6. 1e39 picpicxrefxref
        complexed with fad, fum, gol, hec, na; mutant
        1. region a:103-359,a:506-568 [30431] picpiclink
      7. 1ksu picpicxrefxref
        complexed with fad, fum, hem, na; mutant
        1. region a:103-359,a:506-568 [72932] picpiclink
        2. region b:103-359,b:506-568 [72935] picpiclink
      8. 2b7s picpicxrefxref
        automatically matched to d1qo8a2
        complexed with fad, fum, hem, na; mutant
        1. region a:111-361,a:512-568 [128053] picpiclink
      9. 1qjd picpicxrefxref
        1. region a:103-359,a:506-568 [30432] picpiclink
      10. 1jry picpicxrefxref
        complexed with fad, fum, hem, na; mutant
        1. region a:103-359,a:506-568 [67200] picpiclink
        2. region b:103-359,b:506-568 [67203] picpiclink
      11. 1lj1 picpicxrefxref
        complexed with fad, fum, hem, na; mutant
        1. region a:103-359,a:506-568 [78024] picpiclink
        2. region b:103-359,b:506-568 [78027] picpiclink
      12. 1jrz picpicxrefxref
        complexed with fad, fum, hem, na; mutant
        1. region a:103-359,a:506-568 [67206] picpiclink
        2. region b:103-359,b:506-568 [67209] picpiclink
      13. 1jrx picpicxrefxref
        complexed with fad, fum, hem, na; mutant
        1. region a:103-359,a:506-568 [67194] picpiclink
        2. region b:103-359,b:506-568 [67197] picpiclink
      14. 1p2e picpicxrefxref
        complexed with acy, fad, fum, hem, na; mutant
        1. region a:103-359,a:506-568 [93927] picpiclink
      15. 1p2h picpicxrefxref
        complexed with fad, hem, na, teo; mutant
        1. region a:103-359,a:506-568 [93931] picpiclink
      16. 1qo8 picpicxrefxref
        complexed with fad, hem
        1. region a:103-359,a:506-565 [30433] picpiclink
        2. region d:103-359,d:506-565 [30434] picpiclink
    2. Shewanella putrefaciens [TaxId: 24] [51942] (3)
      1. 1d4d picpicxrefxref
        1. region a:103-359,a:506-569 [30439] picpiclink
      2. 1d4c picpicxrefxref
        1. region a:103-359,a:506-570 [30435] picpiclink
        2. region b:103-359,b:506-570 [30436] picpiclink
        3. region c:103-359,c:506-570 [30437] picpiclink
        4. region d:103-359,d:506-570 [30438] picpiclink
      3. 1d4e picpicxrefxref
        1. region a:103-359,a:506-569 [30440] picpiclink
  5. Adenylylsulfate reductase A subunit [69425]
    1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [69426] (2)
      1. 1jnr picpicxrefxrefxref
        complexed with fad, fs4, gol
        1. region a:2-256,a:402-502 [66967] picpiclink
        2. region c:2-256,c:402-502 [66971] picpiclink
      2. 1jnz picpicxrefxrefxref
        complexed with fad, fs4, so3
        1. region a:2-256,a:402-502 [71767] picpiclink
        2. region c:2002-2256,c:2402-2502 [71771] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk