Structural Classification of Proteins
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Superfamily: Flavoproteins

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Flavodoxin-like [52171]
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. Superfamily: Flavoproteins [52218]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Flavodoxin-related [52219] (13)
    binds FMN
    1. Flavodoxin [52220]
      1. Chondrus crispus [TaxId: 2769] [52221] (1) picpic
      2. Desulfovibrio vulgaris [TaxId: 881] [52222] (25) picpic
        SQ P00323
      3. Anabaena, pcc 7119 and 7120 [TaxId: 1163] [52223] (7) picpic
      4. Escherichia coli [TaxId: 562] [52224] (2) picpic
      5. Synechococcus elongatus PCC 7942 [TaxId: 1140] [52225] (10) picpic
      6. Clostridium beijerinckii [TaxId: 1520] [52226] (16) picpic
      7. Helicobacter pylori [TaxId: 210] [69446] (1) picpic
      8. Megasphaera elsdenii [TaxId: 907] [142045] (1) picpic
        SQ P00321 1-137
      9. Azotobacter vinelandii [TaxId: 354] [142046] (2) picpic
        SQ P00324 1-179
    2. FMN-binding domain of the cytochrome P450bm-3 [52227]
      1. Bacillus megaterium [TaxId: 1404] [52228] (1) picpic
    3. Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain [52229]
      1. Desulfovibrio gigas [TaxId: 879] [52230] (1) picpic
    4. ROO-like flavoprotein TM0755, C-terminal domain [110466]
      1. Thermotoga maritima [TaxId: 2336] [110467] (1) picpic
        SQ Q9WZL4
    5. Nitric oxide reductase C-terminal domain [142047]
      1. Moorella thermoacetica [TaxId: 1525] [142048] (12) picpic
        SQ Q9FDN7 251-399
  2. Cytochrome p450 reductase N-terminal domain-like [52231] (4)
    1. NADPH-cytochrome p450 reductase, N-terminal domain [52232]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [52233] (4) picpic
      2. Human (Homo sapiens) [TaxId: 9606] [52234] (1) picpic
    2. Nitric oxide (NO) synthase FMN domain [110468]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [110469] (1) picpic
        SQ P29476 750-1413
    3. Sulfite reductase alpha-component CysJ N-terminal domain [142049]
      1. Escherichia coli [TaxId: 562] [142050] (1) picpic
        SQ P38038 63-208
  3. Quinone reductase [52235] (6)
    binds FAD
    1. NAD(P)H:quinone reductase [52236]
      1. Mouse (Mus musculus) [TaxId: 10090] [52237] (1) picpic
      2. Rat (Rattus rattus) [TaxId: 10117] [52238] (1) picpic
      3. Human (Homo sapiens) [TaxId: 9606] [52239] (16) picpic
    2. Quinone reductase type 2 (menadione reductase) [52240]
      1. Human (Homo sapiens) [TaxId: 9606] [52241] (24) picpic
    3. ACP phosphodiesterase AcpD [110470]
      evolved new enzymatic activity
      1. Escherichia coli [TaxId: 562] [110471] (8) picpic
        SQ P41407
      2. Salmonella typhimurium [TaxId: 90371] [110472] (1) picpic
        SQ Q8XFP4
  4. Hypothetical protein SP1951 [102234] (1)
    1. Hypothetical protein SP1951 [102235]
      1. (Streptococcus pneumoniae) [TaxId: 1313] [102236] (3) picpic
  5. Hypothetical protein YwqN [102237] (1)
    1. Hypothetical protein YwqN [102238]
      Trp repressor binding protein
      1. Bacillus subtilis [TaxId: 1423] [102239] (1) picpic
  6. NADPH-dependent FMN reductase [89590] (4)
    Pfam 03358
    1. Azobenzene reductase [89591]
      1. Bacillus subtilis [TaxId: 1423] [89592] (5) picpic
        YhdA gene product
    2. Hypothetical protein Ylr011wp [110473]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110474] (1) picpic
        SQ Q07923
    3. Hypothetical protein PA1204 [110475]
      1. Pseudomonas aeruginosa [TaxId: 287] [110476] (2) picpic
        SQ Q9I4D4 5-167
    4. Putative arsenical resistance protein [142051]
      1. Shigella flexneri [TaxId: 623] [142052] (4) picpic
        SQ Q7UC03 1-233
  7. Flavoprotein NrdI [110477] (1)
    1. Flavoprotein NrdI [110478]
      1. Bacillus subtilis [TaxId: 1423] [110479] (1) picpic
        SQ P50618
  8. WrbA-like [117474] (3)
    1. Trp repressor binding protein WrbA [117475]
      1. Deinococcus radiodurans [TaxId: 1299] [117476] (9) picpic
        SQ Q9RYU4
      2. Pseudomonas aeruginosa [TaxId: 287] [142053] (5) picpic
        SQ Q9I509 3-198! SQ Q9I509 4-196
    2. Flavodoxin FldA [142054]
      1. Aquifex aeolicus [TaxId: 63363] [142055] (6) picpic
        SQ O67866 1-184
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk