Structural Classification of Proteins
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Family: Aminoacid dehydrogenases

dimerisation domain; contains additional structures including two extra N-terminal strands in the beta-sheet

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Aminoacid dehydrogenase-like, N-terminal domain [53222]
    core: 3 layers: a/b/a; parallel beta-sheet of 4 strands; 2134
  4. Superfamily: Aminoacid dehydrogenase-like, N-terminal domain [53223]
    link to SUPERFAMILY database - Superfamily
  5. Family: Aminoacid dehydrogenases [53224]
    dimerisation domain; contains additional structures including two extra N-terminal strands in the beta-sheet

Protein Domains:

  1. Glutamate dehydrogenase [53225]
    1. Clostridium symbiosum [TaxId: 1512] [53226] (4)
      1. 1bgv picpicxref
        1. region a:1-194 [33865] picpiclink
      2. 1k89 picpicxref
        mutant
        1. region a:1-194 [33866] picpiclink
      3. 1hrd picpicxref
        1. region a:1-194 [33867] picpiclink
        2. region b:1-194 [33868] picpiclink
        3. region c:1-194 [33869] picpiclink
      4. 1aup picpicxref
        mutant
        1. region a:1-192 [33870] picpiclink
    2. Archaeon Pyrococcus furiosus [TaxId: 2261] [53227] (1)
      1. 1gtm picpicxref
        complexed with so4
        1. region a:3-180 [33871] picpiclink
        2. region b:3-180 [33872] picpiclink
        3. region c:3-180 [33873] picpiclink
    3. Archaeon Thermococcus profundus [TaxId: 49899] [64106] (1)
      1. 1euz picpicxref
        complexed with so4
        1. region a:4-180 [59514] picpiclink
        2. region b:4-180 [59516] picpiclink
        3. region c:4-180 [59518] picpiclink
        4. region d:4-180 [59520] picpiclink
        5. region e:4-180 [59522] picpiclink
        6. region f:3-180 [59524] picpiclink
    4. Archaeon Thermococcus litoralis [TaxId: 2265] [53228] (1)
      1. 1bvu picpicxref
        1. region a:3-180 [33874] picpiclink
        2. region b:3-180 [33875] picpiclink
        3. region c:3-180 [33876] picpiclink
        4. region d:3-180 [33877] picpiclink
        5. region e:3-180 [33878] picpiclink
        6. region f:3-180 [33879] picpiclink
    5. Thermotoga maritima [TaxId: 2336] [53229] (3)
      1. 1b26 picpicxref
        1. region a:4-178 [33880] picpiclink
        2. region b:4-178 [33881] picpiclink
        3. region c:4-178 [33882] picpiclink
        4. region d:4-178 [33883] picpiclink
        5. region e:4-178 [33884] picpiclink
        6. region f:4-178 [33885] picpiclink
      2. 2tmg picpicxref
        1. region a:4-178 [33886] picpiclink
        2. region b:4-178 [33887] picpiclink
        3. region c:4-178 [33888] picpiclink
        4. region d:4-178 [33889] picpiclink
        5. region e:4-178 [33890] picpiclink
        6. region f:4-178 [33891] picpiclink
      3. 1b3b picpicxref
        1. region a:4-178 [33892] picpiclink
        2. region b:4-178 [33893] picpiclink
        3. region c:4-178 [33894] picpiclink
        4. region d:4-178 [33895] picpiclink
        5. region e:4-178 [33896] picpiclink
        6. region f:4-178 [33897] picpiclink
    6. Cow (Bos taurus) [TaxId: 9913] [53230] (5)
      1. 1hwx picpicxref
        complexed with glu, gtp, nai
        1. region a:1-208 [33898] picpiclink
        2. region b:1-208 [33899] picpiclink
        3. region c:1-208 [33900] picpiclink
        4. region d:1-208 [33901] picpiclink
        5. region e:1-208 [33902] picpiclink
        6. region f:1-208 [33903] picpiclink
      2. 1nr7 picpicxref
        1. region a:6-208 [86096] picpiclink
        2. region b:6-208 [86098] picpiclink
        3. region c:6-208 [86100] picpiclink
        4. region d:6-208 [86102] picpiclink
        5. region e:6-208 [86104] picpiclink
        6. region f:6-208 [86106] picpiclink
        7. region g:6-208 [86108] picpiclink
        8. region h:6-208 [86110] picpiclink
        9. region i:6-208 [86112] picpiclink
        10. region j:6-208 [86114] picpiclink
        11. region k:6-208 [86116] picpiclink
        12. region l:6-208 [86118] picpiclink
      3. 1hwz picpicxref
        complexed with glu, gtp, ndp
        1. region a:1-208 [33904] picpiclink
        2. region b:1-208 [33905] picpiclink
        3. region c:1-208 [33906] picpiclink
        4. region d:1-208 [33907] picpiclink
        5. region e:1-208 [33908] picpiclink
        6. region f:1-208 [33909] picpiclink
      4. 1hwy picpicxref
        complexed with akg, nad, po4
        1. region a:1-208 [33910] picpiclink
        2. region b:1-208 [33911] picpiclink
        3. region c:1-208 [33912] picpiclink
        4. region d:1-208 [33913] picpiclink
        5. region e:1-208 [33914] picpiclink
        6. region f:1-208 [33915] picpiclink
      5. 1nqt picpicxref
        complexed with adp
        1. region a:6-208 [86053] picpiclink
        2. region b:6-208 [86055] picpiclink
        3. region c:6-208 [86057] picpiclink
        4. region d:6-208 [86059] picpiclink
        5. region e:6-208 [86061] picpiclink
        6. region f:6-208 [86063] picpiclink
        7. region g:6-208 [86065] picpiclink
        8. region h:6-208 [86067] picpiclink
        9. region i:6-208 [86069] picpiclink
        10. region j:6-208 [86071] picpiclink
        11. region k:6-208 [86073] picpiclink
        12. region l:6-208 [86075] picpiclink
    7. Human (Homo sapiens) [TaxId: 9606] [75252] (2)
      1. 1l1f picpicxref
        1. region a:10-212 [73457] picpiclink
        2. region b:10-212 [73459] picpiclink
        3. region c:10-212 [73461] picpiclink
        4. region d:10-212 [73463] picpiclink
        5. region e:10-212 [73465] picpiclink
        6. region f:10-212 [73467] picpiclink
      2. 1nr1 picpicxref
        mutant
        1. region a:10-212 [86081] picpiclink
        2. region b:10-212 [86083] picpiclink
        3. region c:10-212 [86085] picpiclink
        4. region d:10-212 [86087] picpiclink
        5. region e:10-212 [86089] picpiclink
        6. region f:10-212 [86091] picpiclink
    8. Pyrobaculum islandicum [TaxId: 2277] [117471] (1)
      SQ Q9Y8I4
      1. 1v9l picpicxref
        complexed with nad
        1. region a:4-179 [113584] picpiclink
        2. region b:4-179 [113586] picpiclink
        3. region c:4-179 [113588] picpiclink
        4. region d:4-179 [113590] picpiclink
        5. region e:4-179 [113592] picpiclink
        6. region f:4-179 [113594] picpiclink
  2. Leucine dehydrogenase [53231]
    1. Bacillus sphaericus [TaxId: 1421] [53232] (1)
      1. 1leh picpicxref
        1. region a:1-134 [33916] picpiclink
        2. region b:1-134 [33917] picpiclink
  3. Phenylalanine dehydrogenase [53233]
    1. Rhodococcus sp., M4 [TaxId: 1831] [53234] (4)
      1. 1c1d picpicxref
        complexed with ioh, k, na, nad, phe, po4
        1. region a:1-148 [33918] picpiclink
        2. region b:1-148 [33919] picpiclink
      2. 1c1x picpicxref
        complexed with ioh, k, lla, na, nad, po4
        1. region a:1-148 [33920] picpiclink
        2. region b:1-148 [33921] picpiclink
      3. 1bw9 picpicxref
        complexed with 1py, edo, ipa, k, na, nad, po4
        1. region a:1-148 [33922] picpiclink
        2. region b:401-548 [33923] picpiclink
      4. 1bxg picpicxref
        complexed with hci, k, nad, po4
        1. region a:1-148 [33924] picpiclink
        2. region b:401-548 [33925] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk