Superfamily: PEP carboxykinase-like

uperfamily

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: PEP carboxykinase-like [53794]
   contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side
4. Superfamily: PEP carboxykinase-like [53795]
   uperfamily

Families:

1. PEP carboxykinase C-terminal domain [53796] (4)
   1. Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) [68921]
      1. Escherichia coli [TaxId: 562] [53798] (10)
         1. 2olr
            automatically matched to d1aq2_1
            complexed with atp, cl, co2, mg
            1. region a:228-540 [139140]
         2. 1ayl
            complexed with atp, mg, oxl
            1. region a:228-540 [64718]
         3. 1os1
            complexed with atp, ca, mg, pyr
            1. region a:228-540 [93467]
         4. 2olq
            automatically matched to d1aq2_1
            complexed with atp, co2, mg, mn
            1. region a:228-540 [139138]
         5. 2py7
            automatically matched to d1aq2a1
            complexed with atp, mg, mn; mutant
            1. region x:228-540 [149933]
         6. 1oen
            complexed with act
            1. region a:228-540 [64750]
         7. 1k3d
            complexed with adp, af3, mg
            1. region a:228-540 [68101]
         8. 1aq2
            complexed with atp, mg, mn, pyr
            1. region a:228-540 [64716]
         9. 1k3c
            complexed with adp, af3, mg, pyr
            1. region a:228-540 [68099]
         10. 2pxz
             automatically matched to d1aq2a1
             complexed with atp, co2, mg, mn, oaa
             1. region x:228-540 [149926]
      2. Thermus thermophilus [TaxId: 274] [82553] (7)
         SQ Q7SIC6
         1. 1j3b
            complexed with ca, gol, po4
            1. region a:212-529 [77071]
            2. region b:212-528 [77073]
         2. 1xkv
            automatically matched to d1j3ba1
            complexed with atp, ca, gol, po4
            1. region a:212-529 [122089]
         3. 1xkv
            automatically matched to d1j3ba1
            complexed with atp, ca, gol, po4
            1. region b:212-528 [122091]
         4. 2pc9
            automatically matched to d1j3ba1
            complexed with atp, ca, po4
            1. region a:212-527 [149378]
         5. 2pc9
            automatically matched to d1j3ba1
            complexed with atp, ca, po4
            1. region b:212-527 [149380]
         6. 2pc9
            automatically matched to d1j3ba1
            complexed with atp, ca, po4
            1. region c:212-527 [149382]
         7. 2pc9
            automatically matched to d1j3ba1
            complexed with atp, ca, po4
            1. region d:212-527 [149384]
      3. Trypanosoma cruzi [TaxId: 5693] [69611] (1)
         1. 1ii2
            complexed with so4
            1. region a:201-523 [66146]
            2. region b:201-523 [66148]
   2. Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) [69612]
      1. Human (Homo sapiens) [TaxId: 9606] [69613] (8)
         1. 1khb
            complexed with act, edo, gto, mn
            1. region a:260-622 [68606]
         2. 1nhx
            complexed with edo, ftb, mn, na, pep
            1. region a:260-622 [91886]
         3. 1khf
            complexed with edo, mn, na, pep
            1. region a:260-622 [68611]
         4. 1m51
            complexed with act, edo, mn, tsx
            1. region a:260-622 [91186]
         5. 1khg
            complexed with edo, mn
            1. region a:260-622 [68613]
         6. 1khe
            complexed with gto, mn
            1. region a:260-622 [68609]
         7. 2gmv
            automatically matched to d1khba1
            complexed with mn, pep, un8
            1. region a:260-622 [135394]
         8. 2gmv
            automatically matched to d1khba1
            complexed with mn, pep, un8
            1. region b:260-622 [135396]
2. HPr kinase HprK C-terminal domain [64186] (3)
   1. HPr kinase HprK C-terminal domain [64187]
      1. Lactobacillus casei [TaxId: 1582] [64188] (3)
         1. 1kkm
            C-terminal domain in complex with P-Ser-HPr
            complexed with ca, po4, sep; mutant
            1. chain a [72654]
            2. chain b [72655]
            3. chain c [72656]
         2. 1kkl
            C-terminal domain in complex with HPr
            complexed with ca; mutant
            1. chain a [72648]
            2. chain b [72649]
            3. chain c [72650]
         3. 1jb1
            C-terminal domain only
            complexed with po4
            1. chain a [62832]
      2. Staphylococcus xylosus [TaxId: 1288] [75326] (1)
         1. 1ko7
            complexed with po4
            1. region a:130-298 [72798]
            2. region b:130-298 [72800]
      3. Mycoplasma pneumoniae [TaxId: 2104] [82554] (1)
         1. 1knx
            1. region a:133-309 [77460]
            2. region b:133-308 [77462]
            3. region c:133-311 [77464]
            4. region d:133-307 [77466]
            5. region e:133-311 [77468]
            6. region f:133-307 [77470]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk