Structural Classification of Proteins
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Superfamily: DAK1/DegV-like

domain folds and architecture show some similarity to the tubulin-like GTPases; the nucleotide-binding sites of the Dihydroxyacetone kinase and tubulin families are different
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: DAK1/DegV-like [82548]
    2 different domains; d1: [core: 3 layers, a/b/a; parallel sheet of 5 strands, order: 2134]; D2: [2 layers, a/b; mixed sheet of 6 strands, order 321645; strands 2 and 6 are antiparallel to the rest]
  4. Superfamily: DAK1/DegV-like [82549]
    domain folds and architecture show some similarity to the tubulin-like GTPases; the nucleotide-binding sites of the Dihydroxyacetone kinase and tubulin families are different
    link to SUPERFAMILY database - Superfamily

Families:

  1. DegV-like [82550] (2)
    Pfam 02645, DUF194
    1. Hypothetical protein TM841 [82551]
      reveals fatty acid binding function
      1. Thermotoga maritima [TaxId: 2336] [82552] (2) picpic
        SQ Q9X1H9
    2. Hypothetical protein apc36103 [102686]
      lipid-binding protein; Bacilus subtilis YitS ortholog
      1. Bacillus stearothermophilus [TaxId: 1422] [102687] (1) picpic
  2. DAK1 [109613] (2)
    Pfam 02733
    1. Dihydroxyacetone kinase subunit K, DhaK [109614]
      1. Escherichia coli [TaxId: 562] [109615] (4) picpic
        SQ P76015 20-366
        gene product YcgT
    2. Dihydroxyacetone kinase [109616]
      contains additional alpha-helical, ATP-binding domain
      1. Citrobacter freundii [TaxId: 546] [109617] (2) picpic

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk