Fold: Amidase signature (AS) enzymes

possible duplication: the topologies of N- and C-terminal halves are similar; 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213549A867 (A=10); strands from 5 to 9 are antiparallel to the rest

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: Amidase signature (AS) enzymes [75303]
   possible duplication: the topologies of N- and C-terminal halves are similar; 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213549A867 (A=10); strands from 5 to 9 are antiparallel to the rest

Superfamilies:

1. Amidase signature (AS) enzymes [75304] (1)
   uperfamily
   1. Amidase signature (AS) enzymes [75305] (5)
      1. Malonamidase E2 [75306]
         1. Bradyrhizobium japonicum [TaxId: 375] [75307] (12)
            1. 1ock
               1. chain a [86802]
               2. chain b [86803]
            2. 1o9p
               complexed with mla; mutant
               1. chain a [92681]
               2. chain b [92682]
            3. 1o9q
               mutant
               1. chain a [92683]
               2. chain b [92684]
            4. 1och
               mutant
               1. chain a [92774]
               2. chain b [92775]
            5. 1obj
               mutant
               1. chain a [92757]
               2. chain b [92758]
            6. 1ocm
               complexed with pop
               1. chain a [86806]
               2. chain b [86807]
            7. 1o9n
               mutant
               1. chain a [92677]
               2. chain b [92678]
            8. 1obl
               complexed with mla; mutant
               1. chain a [92761]
               2. chain b [92762]
            9. 1ocl
               complexed with mla
               1. chain a [86804]
               2. chain b [86805]
            10. 1obk
                mutant
                1. chain a [92759]
                2. chain b [92760]
            11. 1obi
                mutant
                1. chain a [92755]
                2. chain b [92756]
            12. 1o9o
                complexed with mlm; mutant
                1. chain a [92679]
                2. chain b [92680]
      2. Peptide amidase Pam [82529]
         1. Stenotrophomonas maltophilia [TaxId: 40324] [82530] (2)
            1. 1m22
               complexed with epe
               1. chain a [78464]
               2. chain b [78465]
            2. 1m21
               complexed with chy
               1. chain a [78462]
               2. chain b [78463]
      3. Fatty acid amide hydrolase (oleamide hydrolase) [82531]
         elaborated fold with additional helices
         1. Rat (Rattus norvegicus) [TaxId: 10116] [82532] (1)
            1. 1mt5
               complexed with may
               1. chain a [79430]
               2. chain b [79431]
               3. chain c [79432]
               4. chain d [79433]
               5. chain e [79434]
               6. chain f [79435]
               7. chain g [79436]
               8. chain h [79437]
               9. chain i [79438]
               10. chain j [79439]
               11. chain k [79440]
               12. chain l [79441]
               13. chain m [79442]
               14. chain n [79443]
               15. chain o [79444]
               16. chain p [79445]
      4. Glutamyl-tRNA(Gln) amidotransferase subunit A [142738]
         1. Staphylococcus aureus [TaxId: 1280] [142739] (5)
            SQ P63488 1-485
            1. 2f2a
               automatically matched to 2DF4 A:1-485
               complexed with gln, mg
               1. region a:1-485 [132801]
            2. 2g5h
               automatically matched to 2DF4 A:1-485
               complexed with mg
               1. region a:1-485 [134658]
            3. 2dqn
               automatically matched to 2DF4 A:1-485
               complexed with asn, mg
               1. region a:1-485 [131639]
            4. 2df4
               complexed with mn
               1. region a:1-485 [131445]
            5. 2g5i
               automatically matched to 2DF4 A:1-485
               complexed with adp, mg
               1. region a:1-485 [134662]
         2. Thermotoga maritima [TaxId: 2336] [142740] (1)
            SQ Q9X0Z9 1-475
            1. 2gi3
               complexed with act, mpd
               1. region a:1-475 [135220]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk