Structural Classification of Proteins
home mail help root up expand collapse

Family: Cdc48 N-terminal domain-like

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Double psi beta-barrel [50684]
    barrel, closed; n=6, S=10; complex topology with crossover (psi) loops
  4. Superfamily: ADC-like [50692]
    link to SUPERFAMILY database - Superfamily
  5. Family: Cdc48 N-terminal domain-like [50708]

Protein Domains:

  1. N-terminal domain of NSF-N, NSF-Nn [50709]
    NSF-N, the N-terminal 'functional' domain of the N-ethylmaleimide sensitive fusion protein, consists of two structural domains
    1. Hamster (Cricetulus griseus) [TaxId: 10029] [50710] (2)
      1. 1qcs picpicxref
        complexed with so4
        1. region a:0-85 [26927] picpiclink
      2. 1qdn picpicxref
        complexed with bme, so4
        1. region a:1-85 [26928] picpiclink
        2. region b:1-85 [26929] picpiclink
        3. region c:1-85 [26930] picpiclink
    2. Baker's yeast (Saccharomyces cerevisiae), sec18p [TaxId: 4932] [50711] (1)
      1. 1cr5 picpicxref
        1. region a:26-107 [26931] picpiclink
        2. region b:23-107 [26932] picpiclink
        3. region c:26-107 [26933] picpiclink
  2. N-terminal domain of VAT-N, VAT-Nn [50712]
    VAT-N is the N-terminal 'functional' domain of the VCP-like ATPase
    1. Archaeon Thermoplasma acidophilum [TaxId: 2303] [50713] (2)
      1. 1cz5 picpicxref
        1. region a:1-91 [26935] picpiclink
      2. 1cz4 picpicxref
        1. region a:1-91 [26934] picpiclink
  3. Membrane fusion ATPase p97 N-terminal domain , P97-Nn [63796]
    1. Mouse (Mus musculus) [TaxId: 10090] [63797] (5)
      1. 1e32 picpicxrefxref
        complexed with adp
        1. region a:21-106 [59183] picpiclink
      2. 2pjh picpicxref
        automatically matched to d1r7ra1
        1. region b:21-106 [149563] picpiclink
      3. 1r7r picpicxrefxref
        complexed with adp
        1. region a:17-106 [97203] picpiclink
      4. 1oz4 picpicxrefxref
        complete low resolution structure
        complexed with adp, af3, zn
        1. region a:27-106 [93793] picpiclink
        2. region b:27-106 [93797] picpiclink
        3. region c:27-106 [93801] picpiclink
      5. 1s3s picpicxrefxrefxref
        complexed with adp
        1. region a:23-106 [98439] picpiclink
        2. region b:23-106 [98442] picpiclink
        3. region c:22-106 [98445] picpiclink
        4. region d:23-106 [98448] picpiclink
        5. region e:23-106 [98451] picpiclink
        6. region f:18-106 [98454] picpiclink
  4. Peroxisome biogenesis factor 1 (PEX-1), N-terminal domain [110252]
    1. Mouse (Mus musculus) [TaxId: 10090] [110253] (1)
      SQ Q5BL07 13-179
      1. 1wlf picpicxref
        complexed with so4
        1. region a:13-99 [109397] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk