Structural Classification of Proteins
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Fold: Double psi beta-barrel

barrel, closed; n=6, S=10; complex topology with crossover (psi) loops

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Double psi beta-barrel [50684]
    barrel, closed; n=6, S=10; complex topology with crossover (psi) loops

Superfamilies:

  1. Barwin-like endoglucanases [50685] (4)
    link to SUPERFAMILY database - Superfamily
    1. Eng V-like [50686] (3)
      1. Endoglucanase V (Eng V) [50687]
        1. Humicola insolens [TaxId: 34413] [50688] (4) picpic
        2. Fungus (Melanocarpus albomyces) [TaxId: 204285] [89353] (3) picpic
      2. Endoglucanase (CMCase) [159193]
        1. Blue mussel (Mytilus edulis) [TaxId: 6550] [159194] (1) picpic
          SQ P82186 1-180
    2. Pollen allergen PHL P 1 N-terminal domain [82135] (1)
      conserved Eng V active site residues and disulfides; better structural similarity to the ADC-like superfamily
      1. Pollen allergen PHL P 1 N-terminal domain [82136]
        1. Timothy grass (Phleum pratense) [TaxId: 15957] [82137] (1) picpic
    3. Barwin [50689] (1)
      1. Barwin [50690]
        1. Barley (Hordeum vulgare) [TaxId: 4513] [50691] (2) picpic
    4. MLTA-like [159195] (3)
      Pfam 03562 and Pfam 06725 cover the middle and C-terminal parts, respectively; contains large insert domain of the L25-like fold (scop_cf 50714)
      1. Membrane-bound lytic murein transglycosylase A, MLTA [159196]
        1. Agrobacterium tumefaciens [TaxId: 358] [159197] (1) picpic
          SQ Q8UJB9 5-369
        2. Escherichia coli [TaxId: 562] [159198] (8) picpic
          SQ P0A935 22-357! SQ P0A935 23-357! SQ P0A935 24-356
        3. Neisseria gonorrhoeae [TaxId: 485] [159199] (2) picpic
          SQ Q9L6H1 40-441
  2. ADC-like [50692] (3)
    link to SUPERFAMILY database - Superfamily
    1. Pyruvoyl dependent aspartate decarboxylase, ADC [50693] (2)
      1. Pyruvoyl dependent aspartate decarboxylase, ADC [50694]
        autocatalytic enzyme
        1. Escherichia coli [TaxId: 562] [50695] (9) picpic
        2. Helicobacter pylori [TaxId: 210] [110249] (2) picpic
          SQ P56065
    2. Formate dehydrogenase/DMSO reductase, C-terminal domain [50696] (12)
      molybdopterine enzyme
      1. Dimethylsulfoxide reductase (DMSO reductase) [50697]
        1. Rhodobacter sphaeroides [TaxId: 1063] [50698] (1) picpic
        2. Rhodobacter capsulatus [TaxId: 1061] [50699] (10) picpic
      2. Formate dehydrogenase H [50700]
        1. Escherichia coli [TaxId: 562] [50701] (4) picpic
      3. Formate dehydrogenase N, alpha subunit [74987]
        1. Escherichia coli [TaxId: 562] [74988] (2) picpic
      4. Tungsten containing formate dehydrogenase, large subunit [82138]
        1. Desulfovibrio gigas [TaxId: 879] [82139] (1) picpic
      5. Trimethylamine N-oxide reductase [50702]
        1. Shewanella massilia [TaxId: 76854] [50703] (1) picpic
      6. Arsenite oxidase large subunit [50704]
        1. Alcaligenes faecalis [TaxId: 511] [50705] (2) picpic
      7. Periplasmic nitrate reductase alpha chain, NapA [50706]
        1. Desulfovibrio desulfuricans [TaxId: 876] [50707] (8) picpic
          dissimilatory nitrate reductase (NAP)
        2. Rhodobacter sphaeroides [TaxId: 1063] [101827] (1) picpic
      8. Respiratory nitrate reductase 1 alpha chain [101828]
        1. Escherichia coli [TaxId: 562] [101829] (7) picpic
          SQ P09152
      9. Transhydroxylase alpha subunit, AthL [110250]
        1. Pelobacter acidigallici [TaxId: 35816] [110251] (6) picpic
          SQ P80563
      10. NADH-quinone oxidoreductase chain 3, Nqo3, C-terminal domain [141393]
        topoisomer of the common fold, lacking the second psi loop
        1. Thermus thermophilus [TaxId: 274] [141394] (4) picpic
          SQ Q56223 686-767
    3. Cdc48 N-terminal domain-like [50708] (5)
      1. N-terminal domain of NSF-N, NSF-Nn [50709]
        NSF-N, the N-terminal 'functional' domain of the N-ethylmaleimide sensitive fusion protein, consists of two structural domains
        1. Hamster (Cricetulus griseus) [TaxId: 10029] [50710] (2) picpic
        2. Baker's yeast (Saccharomyces cerevisiae), sec18p [TaxId: 4932] [50711] (1) picpic
      2. N-terminal domain of VAT-N, VAT-Nn [50712]
        VAT-N is the N-terminal 'functional' domain of the VCP-like ATPase
        1. Archaeon Thermoplasma acidophilum [TaxId: 2303] [50713] (2) picpic
      3. Membrane fusion ATPase p97 N-terminal domain , P97-Nn [63796]
        1. Mouse (Mus musculus) [TaxId: 10090] [63797] (5) picpic
      4. Peroxisome biogenesis factor 1 (PEX-1), N-terminal domain [110252]
        1. Mouse (Mus musculus) [TaxId: 10090] [110253] (1) picpic
          SQ Q5BL07 13-179
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk