Structural Classification of Proteins
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Superfamily: Small protein B (SmpB)

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Small protein B (SmpB) [74981]
    barrel, closed; n=6, S=8, greek-key, partial similarity to the OB-fold
  4. Superfamily: Small protein B (SmpB) [74982]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Small protein B (SmpB) [74983] (2)
    1. Small protein B (SmpB) [74984]
      tmRNA-binding protein; SsrA-binding protein
      1. Aquifex aeolicus [TaxId: 63363] [74985] (5)
        1. 1p6v picpic
          complexed with tRNA domain of tmRNA
          1. chain a [94191] picpiclink
          2. chain c [94192] picpiclink
        2. 1k8h picpic
          1. chain a [72176] picpiclink
        3. 1zc8 picpicxrefxrefxref
          automatically matched to d1k8ha_
          complexed with du
          1. region k:1-130 [124892] picpiclink
        4. 2ob7 picpic
          automatically matched to d1k8ha_
          1. region b:3-130 [139004] picpiclink
        5. 2ob7 picpic
          automatically matched to d1k8ha_
          1. region c:3-124 [139005] picpiclink
      2. Thermus thermophilus [TaxId: 274] [82130] (6)
        SQ Q8RR57 4-123
        1. 1wjx picpic
          Structural genomics target
          complexed with k
          1. chain a [114716] picpiclink
        2. 2czj picpic
          automatically matched to d1j1ha_
          complexed with 5mu, psu
          1. region a:2-123 [131051] picpiclink
        3. 2czj picpic
          automatically matched to d1j1ha_
          complexed with 5mu, psu
          1. region c:2-123 [131052] picpiclink
        4. 2czj picpic
          automatically matched to d1j1ha_
          complexed with 5mu, psu
          1. region e:2-123 [131053] picpiclink
        5. 2czj picpic
          automatically matched to d1j1ha_
          complexed with 5mu, psu
          1. region g:4-123 [131054] picpiclink
        6. 1j1h picpic
          1. chain a [77056] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk