Structural Classification of Proteins
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Fold: Split barrel-like

barrel; n=6, S=10; greek-key

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Split barrel-like [50474]
    barrel; n=6, S=10; greek-key

Superfamilies:

  1. FMN-binding split barrel [50475] (4)
    related to the ferredoxin reductase-like FAD-binding domain
    link to SUPERFAMILY database - Superfamily
    1. PNP-oxidase like [50476] (21) picpic
    2. NADH:FMN oxidoreductase-like [50482] (5) picpic
      different dimerization mode than in the PNP-oxidase like family
    3. UbiD middle domain-like [141368] (1) picpic
      N terminal part of Pfam 01977; overall structural similarity to one subunit of the NADH:FMN oxidoreductase-like family (scop_fa 50482); not known to bind a flavin cofactor; also includes the N-terminal alpha+beta subdomain (~110 residues)
    4. MTH863-like [159164] (3) picpic
      Pfam 04289; DUF447; a new dimerisation mode involving (included) all-alpha subdomain of the spectrin-like fold (scop_cf 46965)
  2. PilZ domain-like [141371] (2)
    link to SUPERFAMILY database - Superfamily
    1. PilZ domain [141372] (3) picpic
      Pfam 07238
    2. PilZ domain-associated domain [141377] (2) picpic
      this domain preceeds PilZ domain in some proteins
  3. YkvR-like [159173] (1)
    provisional classification, pending better resolution structures
    1. YkvR-like [159174] (1) picpic
      PfamB 102647
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk