Fold: Reductase/isomerase/elongation factor common domain

barrel, closed; n=6, S=10; greek-key

Lineage:

1. Root: scop
2. Class: All beta proteins [48724]
3. Fold: Reductase/isomerase/elongation factor common domain [50412]
   barrel, closed; n=6, S=10; greek-key

Superfamilies:

1. Riboflavin synthase domain-like [63380] (3)
   uperfamily
   1. Riboflavin synthase [63783] (2)
      duplication: consists of two homologous domains
   2. Ferredoxin reductase FAD-binding domain-like [63381] (19)
      coupled with a NADP-binding domain of alpha/beta class
   3. NADPH-cytochrome p450 reductase FAD-binding domain-like [50438] (3)
      there is an alpha-helical subdomain inserted in this domain
2. Riboflavin kinase-like [82114] (2)
   uperfamily
   1. ATP-dependent riboflavin kinase-like [82115] (3)
   2. CTP-dependent riboflavin kinase-like [159154] (2)
      Pfam 01982; newly characterized archaeal family (formerly DUF120)
3. FucI/AraA C-terminal domain-like [50443] (2)
   uperfamily
   1. L-fucose isomerase, C-terminal domain [50444] (1)
   2. AraA C-terminal domain-like [141331] (1)
      C-terminal part of Pfam 02610
4. Translation proteins [50447] (6)
   uperfamily
   1. Elongation factors [50448] (18)
   2. Ribosomal protein L3 [50461] (4)
   3. Ribosomal protein L35ae [117220] (1)
      Pfam 01247
   4. RimM N-terminal domain-like [141338] (1)
      Pfam 01782
   5. Gar1-like SnoRNP [141341] (1)
      stand alone proteins, which are similar structurally but not sequentially to the elongation factor domains, unlike PF0907
   6. AlaX-M N-terminal domain-like [159161] (1)
      Does NOT belong to Pfam 01411

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk